RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 OR10A6Q8NH74 314 aa0.65□□□□□ -2.31
SRP54-214ENST00000630962 CIB1Q99828 191 aa0.65□□□□□ -2.31
SRP54-214ENST00000630962 COPS4Q9BT78 406 aa0.65□□□□□ -2.31
SRP54-214ENST00000630962 OR2AG1Q9H205 316 aa0.65□□□□□ -2.31
SRP54-214ENST00000630962 DDX18Q9NVP1 670 aaKnown RBP0.65□□□□□ -2.31
SRP54-214ENST00000630962 SCML1Q9UN30 329 aa0.65□□□□□ -2.31
SRP54-214ENST00000630962 RPL26L1Q9UNX3 145 aaKnown RBP0.65□□□□□ -2.31
SRP54-214ENST00000630962 SDK1Q7Z5N4 2213 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 IGHV3-73A0A0B4J1V6 119 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 TVP23AA6NH52 213 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 C2orf74A8MZ97 194 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 PSMD11O00231 422 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 FGF16O43320 207 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 GMDSO60547 372 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 GIMD1P0DJR0 217 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 AKR1C4P17516 323 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 SRMP19623 302 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 TSPOP30536 169 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 GABRA3P34903 492 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 UGT2B10P36537 528 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 C1QTNF8P60827 252 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 GUSBP1Q15486 140 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 HBMQ6B0K9 141 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 AGTRAPQ6RW13 159 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 DGAT2L6Q6ZPD8 337 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 ZBTB8OSQ8IWT0 167 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 GATD1Q8NB37 220 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 PEX13Q92968 403 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 MGLLQ99685 303 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 UTP23Q9BRU9 249 aaKnown RBP0.64□□□□□ -2.31
SRP54-214ENST00000630962 PECRQ9BY49 303 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 CHRNA10Q9GZZ6 450 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 NCOR1P1Q9H4R4 102 aa0.64□□□□□ -2.31
SRP54-214ENST00000630962 MEIKINA0A087WXM9 373 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 LOC100653049A0A140TA62 436 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 A0A1W2PPV4 95 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 GSTTP1A0A1W2PQM5 241 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 KRT34O76011 436 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 BGNP21810 368 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 MP68P56378 58 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 RAB2AP61019 212 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 SLC35A2P78381 396 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 ZNF90Q03938 601 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 SKP2Q13309 424 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 FAM229BQ4G0N7 80 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 PABPC1L2AQ5JQF8 200 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 FAM183BPQ6ZVS7 135 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 ZMYND19Q96E35 227 aaPredicted RBP0.63□□□□□ -2.31
SRP54-214ENST00000630962 EBNA1BP2Q99848 306 aaKnown RBP0.63□□□□□ -2.31
SRP54-214ENST00000630962 UPK3BQ9BT76 320 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 ZNF471Q9BX82 626 aaPredicted RBP0.63□□□□□ -2.31
SRP54-214ENST00000630962 GAL3ST2Q9H3Q3 398 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 GOLPH3Q9H4A6 298 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 CRLF2Q9HC73 371 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 ANKHQ9HCJ1 492 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 PSME2Q9UL46 239 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 MRPS16Q9Y3D3 137 aaKnown RBP0.63□□□□□ -2.31
SRP54-214ENST00000630962 TBL2Q9Y4P3 447 aaKnown RBP0.63□□□□□ -2.31
SRP54-214ENST00000630962 DISP1Q96F81 1524 aa0.63□□□□□ -2.31
SRP54-214ENST00000630962 MYO5BQ9ULV0 1848 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 IGKV3D-7A0A0C4DH55 119 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 IGKV3OR2-268A0A0C4DH90 116 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 K7EQS6 105 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 MBP02144 154 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 ATP6V0CP27449 155 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 RAP1GDS1P52306 607 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 ERHP84090 104 aaKnown RBP0.62□□□□□ -2.31
SRP54-214ENST00000630962 PRDX1Q06830 199 aaKnown RBP0.62□□□□□ -2.31
SRP54-214ENST00000630962 PDK2Q15119 407 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 MAPK14Q16539 360 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 TPRXLQ17RH7 258 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 LGALS9CQ6DKI2 356 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 SLC35F6Q8N357 371 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 ASCC1Q8N9N2 400 aaKnown RBP0.62□□□□□ -2.31
SRP54-214ENST00000630962 OR11H1Q8NG94 326 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 TMIGD2Q96BF3 282 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 ZNF396Q96N95 335 aaPredicted RBP0.62□□□□□ -2.31
SRP54-214ENST00000630962 ZNF426Q9BUY5 554 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 TIMM21Q9BVV7 248 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 C1QTNF6Q9BXI9 259 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 MAP1LC3CQ9BXW4 147 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 BEX2Q9BXY8 128 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 USH1CQ9Y6N9 552 aa0.62□□□□□ -2.31
SRP54-214ENST00000630962 FN1P02751 2386 aaKnown RBP0.62□□□□□ -2.31
SRP54-214ENST00000630962 ATAD5Q96QE3 1844 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 ARHGAP32A7KAX9 2087 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 IGKV1-12A0A0C4DH73 117 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 VPS37CA5D8V6 355 aaPredicted RBP0.61□□□□□ -2.31
SRP54-214ENST00000630962 GOLGA8IPA6NC78 632 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 MGAT4DA6NG13 374 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 RFXANKO14593 260 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 CYTH3O43739 400 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 LY6HO94772 140 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 IGKV1D-12P01611 117 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 ZNF705DP0CH99 300 aaPredicted RBP0.61□□□□□ -2.31
SRP54-214ENST00000630962 ZNF705BP0CI00 300 aaPredicted RBP0.61□□□□□ -2.31
SRP54-214ENST00000630962 SPNP16150 400 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 SLC25A16P16260 332 aa0.61□□□□□ -2.31
SRP54-214ENST00000630962 PEBP1P30086 187 aaKnown RBP0.61□□□□□ -2.31
SRP54-214ENST00000630962 CCR7P32248 378 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms