RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 LYRM1O43325 122 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 GSTZ1O43708 216 aaPredicted RBP3.88□□□□□ -1.79
VPS29-212ENST00000621131 ORC5O43913 435 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 CYB5AP00167 134 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 PAHP00439 452 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 IGHV3-9P01782 118 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 HLA-DQB1P01920 261 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 ALDOBP05062 364 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 CRHP06850 196 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 CSF3P09919 207 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 SLC2A1P11166 492 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 FOLR2P14207 255 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 IGFBP3P17936 291 aaPredicted RBP3.88□□□□□ -1.79
VPS29-212ENST00000621131 ZNF93P35789 620 aaPredicted RBP3.88□□□□□ -1.79
VPS29-212ENST00000621131 POU3F4P49335 361 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 BCAP31P51572 246 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 SSBP1Q04837 148 aaKnown RBP3.88□□□□□ -1.79
VPS29-212ENST00000621131 GPR176Q14439 515 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 P2RY14Q15391 338 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 ZNF79Q15937 498 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 GSG1Q2KHT4 349 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 C15orf32Q32M92 178 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 PABPC1L2AQ5JQF8 200 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 GLYATL3Q5SZD4 288 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 C9orf135Q5VTT2 229 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 RTL6Q6ICC9 239 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 Q6ZS92 163 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 UTS2BQ765I0 119 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 KRT74Q7RTS7 529 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 MRPL21Q7Z2W9 205 aaKnown RBP3.88□□□□□ -1.79
VPS29-212ENST00000621131 OR2W3Q7Z3T1 314 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 SNX29P2Q8IUI4 249 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 ZNF584Q8IVC4 421 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 WDFY1Q8IWB7 410 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 SKA3Q8IX90 412 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 C17orf78Q8N4C9 275 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 CNEP1R1Q8N9A8 125 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 STEAP2Q8NFT2 490 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 OR4M2Q8NGB6 313 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 OR51A4Q8NGJ6 313 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 OR1K1Q8NGR3 316 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 OR13C9Q8NGT0 318 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 OR10AC1Q8NH08 325 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 AKR7LQ8NHP1 331 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 KCNG3Q8TAE7 436 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 APOBEC3DQ96AK3 386 aaPredicted RBP3.88□□□□□ -1.79
VPS29-212ENST00000621131 SPSB1Q96BD6 273 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 HAVCR1Q96D42 359 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 REEP6Q96HR9 211 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 GPR137Q96N19 417 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 CDH20Q9HBT6 801 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 GPR84Q9NQS5 396 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 SPRR3Q9UBC9 169 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 CLCF1Q9UBD9 225 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 GHRLQ9UBU3 117 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 OR5V1Q9UGF6 321 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 RAB22AQ9UL26 194 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 PIGLQ9Y2B2 252 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 V9GYS6 101 aa3.88□□□□□ -1.79
VPS29-212ENST00000621131 PRRC2AP48634 2157 aaKnown RBP3.87□□□□□ -1.79
VPS29-212ENST00000621131 FBN1P35555 2871 aaKnown RBP3.87□□□□□ -1.79
VPS29-212ENST00000621131 ZNF816-ZNF321PA0A0X1KG74 233 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 FUOMA2VDF0 154 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 C5orf49A4QMS7 147 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 GGT3PA6NGU5 568 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 A8MXK9 166 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 K7ENP7 123 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 SULT1C2O00338 296 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 ZNF780AO75290 641 aaPredicted RBP3.87□□□□□ -1.79
VPS29-212ENST00000621131 RBBP9O75884 186 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 DHFRP00374 187 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 IGKV3-15P01624 115 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 SELEP16581 610 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 ADRA2CP18825 462 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 BCL3P20749 454 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 CCNOP22674 350 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 CRYGSP22914 178 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 CDK2P24941 298 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 STOMP27105 288 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 OTX1P32242 354 aaPredicted RBP3.87□□□□□ -1.79
VPS29-212ENST00000621131 PRSS3P35030 304 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 RCVRNP35243 200 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 MAGEB1P43366 347 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 ATP1B3P54709 279 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 CLDN12P56749 244 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 RAB25P57735 213 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 TAS2R20P59543 309 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 MRPS15P82914 257 aaKnown RBP3.87□□□□□ -1.79
VPS29-212ENST00000621131 PSG4Q00888 419 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 IFITM3Q01628 133 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 CD300CQ08708 224 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 MADCAM1Q13477 382 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 C2orf76Q3KRA6 126 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 ACSF3Q4G176 576 aaPredicted RBP3.87□□□□□ -1.79
VPS29-212ENST00000621131 HIGD2BQ4VC39 106 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 C1orf100Q5SVJ3 147 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 CLVS2Q5SYC1 327 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 C1QTNF12Q5T7M4 302 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 C1orf185Q5T7R7 199 aa3.87□□□□□ -1.79
VPS29-212ENST00000621131 PLCXD3Q63HM9 321 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms