RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 FAM90A12PA8MX19 464 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 FAM90A5PA8MXJ8 464 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 FAM90A23PA8MXZ1 464 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 C12orf77C9JDV5 145 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 F5H0A9 414 aaPredicted RBP2.88□□□□□ -1.95
LIG4-205ENST00000614526 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.88□□□□□ -1.95
LIG4-205ENST00000614526 J3QW42 95 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 RP2O75695 350 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 IFNA21P01568 189 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 IGHV1-46P01743 117 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 RLN2P04090 185 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 HOXD4P09016 255 aaPredicted RBP2.88□□□□□ -1.95
LIG4-205ENST00000614526 FAM90A15PP0C7V4 464 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 FAM90A13PP0C7W8 464 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 FAM90A14PP0C7W9 464 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 FAM90A24PP0C7X0 464 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 ZNF250P15622 560 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 UCNP55089 124 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 PRB3Q04118 309 aaPredicted RBP2.88□□□□□ -1.95
LIG4-205ENST00000614526 TMEM187Q14656 261 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 ZNF146Q15072 292 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 FIP1L1Q6UN15 594 aaKnown RBP2.88□□□□□ -1.95
LIG4-205ENST00000614526 ZNF497Q6ZNH5 498 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 ZNF695Q8IW36 515 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 Q8IYB0 196 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 SLC35G3Q8N808 338 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 INO80EQ8NBZ0 244 aaPredicted RBP2.88□□□□□ -1.95
LIG4-205ENST00000614526 LILRB4Q8NHJ6 448 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 COQ2Q96H96 371 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 ABHD14BQ96IU4 210 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 DNTTIP1Q9H147 329 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 ZNF835Q9Y2P0 537 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 WIPI2Q9Y4P8 454 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 EPG5Q9HCE0 2579 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.88□□□□□ -1.95
LIG4-205ENST00000614526 LY6HO94772 140 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 HBZP02008 142 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 UQCRFS1P47985 274 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 ADIPOQQ15848 244 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 SMIM21Q3B7S5 101 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 SLC38A6Q8IZM9 456 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 FAM216BQ8N7L0 139 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 RNASE11Q8TAA1 199 aaKnown RBP2.88□□□□□ -1.95
LIG4-205ENST00000614526 CA5BP1Q8WTZ4 195 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 C2orf50Q96LR7 162 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 DMRTA2Q96SC8 542 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 VKORC1Q9BQB6 163 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 SHARPINQ9H0F6 387 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 PIGMQ9H3S5 423 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 GCM1Q9NP62 436 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 RAB18Q9NP72 206 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 KCNIP1Q9NZI2 227 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 GLS2Q9UI32 602 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 MAB21L2Q9Y586 359 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 CFAP46Q8IYW2 2715 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 YLPM1P49750 1951 aaKnown RBP2.88□□□□□ -1.95
LIG4-205ENST00000614526 ARFGEF3Q5TH69 2177 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 KANTRA0A1W2PQU2 76 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 TMEM30CPA0ZSE6 113 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 HMSDA8MTL9 139 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 GPR31O00270 319 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 TMPRSS2O15393 492 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 ST8SIA5O15466 376 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 ADAM20O43506 726 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 PGLYRP1O75594 196 aaPredicted RBP2.88□□□□□ -1.95
LIG4-205ENST00000614526 IFNA7P01567 189 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 CD8AP01732 235 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 PTAFRP25105 342 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 NFYBP25208 207 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 TLE1Q04724 770 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 FGL1Q08830 312 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 SURF2Q15527 256 aaPredicted RBP2.88□□□□□ -1.95
LIG4-205ENST00000614526 TESK1Q15569 626 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 LIAT1Q6ZQX7 453 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 CMTM1Q8IZ96 169 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 SPERTQ8NA61 448 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 ANGPTL6Q8NI99 470 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 MSI2Q96DH6 328 aaKnown RBP2.88□□□□□ -1.95
LIG4-205ENST00000614526 PIK3IP1Q96FE7 263 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 BSCL2Q96G97 398 aaPredicted RBP2.88□□□□□ -1.95
LIG4-205ENST00000614526 RSRP1Q9BUV0 290 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 DYNLRB1Q9NP97 96 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 COQ3Q9NZJ6 369 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 UBQLN2Q9UHD9 624 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 TNFSF18Q9UNG2 199 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 OR2W1Q9Y3N9 320 aa2.88□□□□□ -1.95
LIG4-205ENST00000614526 TRBV6-7A0A0A0MS04 114 aa2.87□□□□□ -1.95
LIG4-205ENST00000614526 E7EQL1 145 aa2.87□□□□□ -1.95
LIG4-205ENST00000614526 H3BP45 60 aa2.87□□□□□ -1.95
LIG4-205ENST00000614526 MBPP02686 304 aaPredicted RBP2.87□□□□□ -1.95
LIG4-205ENST00000614526 GLAP06280 429 aa2.87□□□□□ -1.95
LIG4-205ENST00000614526 SERPINE2P07093 398 aa2.87□□□□□ -1.95
LIG4-205ENST00000614526 NDUFB7P17568 137 aa2.87□□□□□ -1.95
LIG4-205ENST00000614526 CA7P43166 264 aa2.87□□□□□ -1.95
LIG4-205ENST00000614526 RAB14P61106 215 aa2.87□□□□□ -1.95
LIG4-205ENST00000614526 RPS16P62249 146 aaKnown RBP2.87□□□□□ -1.95
LIG4-205ENST00000614526 POLR2GP62487 172 aaKnown RBP eCLIP2.87□□□□□ -1.95
LIG4-205ENST00000614526 TAGLNQ01995 201 aaKnown RBP2.87□□□□□ -1.95
LIG4-205ENST00000614526 ZNF816Q0VGE8 651 aaPredicted RBP2.87□□□□□ -1.95
LIG4-205ENST00000614526 HNF4GQ14541 408 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms