RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 NGFP01138 241 aa14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 IGKV1D-12P01611 117 aa14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 NOVA1P51513 510 aaKnown RBP14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 P4HA3Q7Z4N8 544 aa14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 FOXRED2Q8IWF2 684 aa14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 GCNT2Q8N0V5 402 aa14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 OR56B2PQ8NGI1 322 aa14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 OR5H2Q8NGV7 314 aa14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 FRZBQ92765 325 aa14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 SPSB4Q96A44 273 aa14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 HDHD3Q9BSH5 251 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 OR51B6Q9H340 312 aa14.63□□□□□ -0.07
SHKBP1-205ENST00000594973 HSD17B6O14756 317 aa14.62□□□□□ -0.07
SHKBP1-205ENST00000594973 FUT6P51993 359 aa14.62□□□□□ -0.07
SHKBP1-205ENST00000594973 PIGYQ3MUY2 71 aa14.62□□□□□ -0.07
SHKBP1-205ENST00000594973 CYB5R2Q6BCY4 276 aa14.62□□□□□ -0.07
SHKBP1-205ENST00000594973 CSNK2A3Q8NEV1 391 aa14.62□□□□□ -0.07
SHKBP1-205ENST00000594973 EMG1Q92979 244 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-205ENST00000594973 ERGIC1Q969X5 290 aa14.62□□□□□ -0.07
SHKBP1-205ENST00000594973 RBFOX3A6NFN3 312 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 SERPINE3A8MV23 424 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 B4DEV8 164 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 E5RGE8 158 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 EREGO14944 169 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 ARR3P36575 388 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 OR3A2P47893 321 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 FHITP49789 147 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 DLK1P80370 383 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 PLP2Q04941 152 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 GPR157Q5UAW9 335 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 FBXW9Q5XUX1 488 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 BRICD5Q6PL45 260 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 TVP23CQ96ET8 276 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 FAAP24Q9BTP7 215 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 CRIM1Q9NZV1 1036 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 OSGIN2Q9Y236 505 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 NSG2Q9Y328 171 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 GCGP01275 180 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 PDCD1Q15116 288 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 MRPL21Q7Z2W9 205 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 SLC35E3Q7Z769 313 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 CALHM1Q8IU99 346 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 TMEM183AQ8IXX5 376 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 POM121Q96HA1 1249 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 OR14J1Q9UGF5 321 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 SPTBN2O15020 2390 aa14.61□□□□□ -0.07
SHKBP1-205ENST00000594973 K7N7A8 449 aa14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 GEMIN2O14893 280 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 G0S2P27469 103 aa14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 CD200P41217 278 aa14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 MALLQ13021 153 aa14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 GAGE1Q13065 139 aa14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 PPA1Q15181 289 aa14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 C21orf62-AS1Q17RA5 79 aa14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 APOBEC3DQ96AK3 386 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 FAM210BQ96KR6 192 aa14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 POM121L2Q96KW2 1035 aa14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 REPIN1Q9BWE0 567 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 GPR137BO60478 399 aa14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 SRP19P09132 144 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 OR5H8P0DN80 308 aa14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 PI3P19957 117 aa14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 PPP1CCP36873 323 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 RBMXP38159 391 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 C1orf87Q8N0U7 546 aa14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 FBXL14Q8N1E6 418 aa14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 OR1K1Q8NGR3 316 aa14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 TRIB1Q96RU8 372 aa14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 RARRES2Q99969 163 aa14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 EHFQ9NZC4 300 aa14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 PTPRZ1P23471 2315 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-205ENST00000594973 IGKV1D-8A0A087WSZ0 117 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 IFNA21P01568 189 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 OR5AC1P0C628 307 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 METTL15P1P0C7V9 234 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 CHRFAM7AQ494W8 412 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 AADACL3Q5VUY0 350 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 SLC25A26Q70HW3 274 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 ZNF429Q86V71 674 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 OR13G1Q8NGZ3 307 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 DYRK2Q92630 601 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 TMEM242Q9NWH2 141 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 URGCP-MRPS24S4R325 110 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 PTPRBP23467 1997 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 TRAV17A0A0B4J275 112 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 A0A1W2PR80 420 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 M0R143 59 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 PRDX4Q13162 271 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 OSR2Q8N2R0 312 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 ZNF611Q8N823 705 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 GMPPAQ96IJ6 420 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 NIPSNAP3BQ9BS92 247 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 ATG101Q9BSB4 218 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 WFDC1Q9HC57 220 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 ST3GAL6Q9Y274 331 aa14.59□□□□□ -0.07
SHKBP1-205ENST00000594973 MED12LQ86YW9 2145 aa14.58□□□□□ -0.07
SHKBP1-205ENST00000594973 DFFBO76075 338 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 LINC00614P0C842 121 aa14.58□□□□□ -0.08
SHKBP1-205ENST00000594973 SPINK2P20155 84 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms