RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 PNRC2Q9NPJ4 139 aaKnown RBP13.99□□□□□ -0.17
LINC00554-201ENST00000564841 V9GYS6 101 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 LY6G6EA0A0G2JKS1 128 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 G3V3Y1 287 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 HBE1P02100 147 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 DOK3Q7L591 496 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 TIPARPQ7Z3E1 657 aaKnown RBP13.99□□□□□ -0.17
LINC00554-201ENST00000564841 Q96M66 194 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 DNAJC4Q9NNZ3 241 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 ASCL3Q9NQ33 180 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 U3KQA8 63 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 ESPL1Q14674 2120 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 GRIFINA4D1Z8 144 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 ZNF814B7Z6K7 855 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 TRDCB7Z8K6 153 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 EFNA2O43921 213 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 LILRA1O75019 489 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 CCL4P13236 92 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 GCH1P30793 250 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 ECI1P42126 302 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 CLRN1P58418 232 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 OR1N1Q8NGS0 311 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 TM2D1Q9BX74 207 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 Q9N2K0 584 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 PARD6AQ9NPB6 346 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 SERINC1Q9NRX5 453 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 KLRF1Q9NZS2 232 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 MPPED1O15442 326 aa13.98□□□□□ -0.17
LINC00554-201ENST00000564841 CHRNA7P36544 502 aa13.98□□□□□ -0.17
LINC00554-201ENST00000564841 PDLIM4P50479 330 aa13.98□□□□□ -0.17
LINC00554-201ENST00000564841 PAX9P55771 341 aa13.98□□□□□ -0.17
LINC00554-201ENST00000564841 MTCP1P56278 107 aa13.98□□□□□ -0.17
LINC00554-201ENST00000564841 RPL23P62829 140 aaKnown RBP13.98□□□□□ -0.17
LINC00554-201ENST00000564841 BSXQ3C1V8 233 aa13.98□□□□□ -0.17
LINC00554-201ENST00000564841 ETFRF1Q6IPR1 90 aa13.98□□□□□ -0.17
LINC00554-201ENST00000564841 ZNF385AQ96PM9 386 aaKnown RBP13.98□□□□□ -0.17
LINC00554-201ENST00000564841 DUSP23Q9BVJ7 150 aa13.98□□□□□ -0.17
LINC00554-201ENST00000564841 B3GAT1Q9P2W7 334 aa13.98□□□□□ -0.17
LINC00554-201ENST00000564841 RALGAPA1Q6GYQ0 2036 aa13.98□□□□□ -0.17
LINC00554-201ENST00000564841 BLACEA4D250 179 aa13.98□□□□□ -0.17
LINC00554-201ENST00000564841 BMP5P22003 454 aa13.98□□□□□ -0.17
LINC00554-201ENST00000564841 PRAMEF20Q5VT98 475 aa13.98□□□□□ -0.17
LINC00554-201ENST00000564841 TBC1D26Q86UD7 250 aa13.98□□□□□ -0.17
LINC00554-201ENST00000564841 C1orf210Q8IVY1 113 aa13.98□□□□□ -0.17
LINC00554-201ENST00000564841 C11orf42Q8N5U0 333 aa13.98□□□□□ -0.17
LINC00554-201ENST00000564841 OR2AE1Q8NHA4 323 aa13.98□□□□□ -0.17
LINC00554-201ENST00000564841 PYGO2Q9BRQ0 406 aa13.98□□□□□ -0.17
LINC00554-201ENST00000564841 KLHL13Q9P2N7 655 aa13.98□□□□□ -0.17
LINC00554-201ENST00000564841 TRBV11-1A0A0K0K1C0 115 aa13.97□□□□□ -0.17
LINC00554-201ENST00000564841 GAGE1Q13065 139 aa13.97□□□□□ -0.17
LINC00554-201ENST00000564841 NEK7Q8TDX7 302 aa13.97□□□□□ -0.17
LINC00554-201ENST00000564841 SIGLEC12Q96PQ1 595 aa13.97□□□□□ -0.17
LINC00554-201ENST00000564841 OR2J1Q9GZK6 312 aa13.97□□□□□ -0.17
LINC00554-201ENST00000564841 LINC00614P0C842 121 aa13.97□□□□□ -0.17
LINC00554-201ENST00000564841 ZNF92Q03936 586 aa13.97□□□□□ -0.17
LINC00554-201ENST00000564841 TCF23Q7RTU1 214 aa13.97□□□□□ -0.17
LINC00554-201ENST00000564841 OR5B12Q96R08 314 aa13.97□□□□□ -0.17
LINC00554-201ENST00000564841 RASL10BQ96S79 203 aa13.97□□□□□ -0.17
LINC00554-201ENST00000564841 ATP5SQ99766 215 aa13.97□□□□□ -0.17
LINC00554-201ENST00000564841 MSL2Q9HCI7 577 aa13.97□□□□□ -0.17
LINC00554-201ENST00000564841 FOXJ2Q9P0K8 574 aa13.97□□□□□ -0.17
LINC00554-201ENST00000564841 IGHV3-15A0A0B4J1V0 119 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 A0A0G2JRQ6 117 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 DEFA4P12838 97 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 EGR1P18146 543 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 MSX1P28360 303 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 GNRHRP30968 328 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 CDKN1AP38936 164 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 RPS18P62269 152 aaKnown RBP13.96□□□□□ -0.17
LINC00554-201ENST00000564841 ZXDAP98168 799 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 ARL16Q0P5N6 197 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 TMEM241Q24JQ0 296 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 ACTL10Q5JWF8 245 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 RHBDD2Q6NTF9 364 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 SELENOHQ8IZQ5 122 aaKnown RBP13.96□□□□□ -0.17
LINC00554-201ENST00000564841 NBEAQ8NFP9 2946 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 IGKV1-27A0A075B6S5 117 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 CD82P27701 267 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 CNN1P51911 297 aaKnown RBP13.96□□□□□ -0.17
LINC00554-201ENST00000564841 HERV-K104P61576 105 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 MYBPHQ13203 477 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 H1FOOQ8IZA3 346 aaPredicted RBP13.96□□□□□ -0.17
LINC00554-201ENST00000564841 ACY3Q96HD9 319 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 TMEM222Q9H0R3 208 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 WNT5BQ9H1J7 359 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 PLK3Q9H4B4 646 aa13.96□□□□□ -0.17
LINC00554-201ENST00000564841 CELA2AP08217 269 aa13.96□□□□□ -0.18
LINC00554-201ENST00000564841 ENDOGQ14249 297 aaKnown RBP13.96□□□□□ -0.18
LINC00554-201ENST00000564841 FAM189A2Q15884 450 aa13.96□□□□□ -0.18
LINC00554-201ENST00000564841 OR10G4Q8NGN3 311 aa13.96□□□□□ -0.18
LINC00554-201ENST00000564841 MRPL13Q9BYD1 178 aaKnown RBP13.96□□□□□ -0.18
LINC00554-201ENST00000564841 CTDSP1Q9GZU7 261 aa13.96□□□□□ -0.18
LINC00554-201ENST00000564841 ZNF286AQ9HBT8 521 aa13.96□□□□□ -0.18
LINC00554-201ENST00000564841 ZNF160Q9HCG1 818 aa13.96□□□□□ -0.18
LINC00554-201ENST00000564841 GVINP1Q7Z2Y8 2422 aa13.95□□□□□ -0.18
LINC00554-201ENST00000564841 A0A1W2PNV4 684 aa13.95□□□□□ -0.18
LINC00554-201ENST00000564841 MOB3AQ96BX8 217 aa13.95□□□□□ -0.18
LINC00554-201ENST00000564841 SLC7A10Q9NS82 523 aa13.95□□□□□ -0.18
LINC00554-201ENST00000564841 OR6C3Q9NZP0 311 aa13.95□□□□□ -0.18
LINC00554-201ENST00000564841 NAT8Q9UHE5 227 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms