RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 KCTD18Q6PI47 426 aaPredicted RBP3.94□□□□□ -1.78
SMG1-207ENST00000563235 TIFABQ6ZNK6 161 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 TGIF2LYQ8IUE0 185 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 PIANPQ8IYJ0 282 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 EXOC3-AS1Q8N2X6 119 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 OR5K1Q8NHB7 308 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 ZNF564Q8TBZ8 553 aaPredicted RBP3.94□□□□□ -1.78
SMG1-207ENST00000563235 RBPMSQ93062 196 aaKnown RBP3.94□□□□□ -1.78
SMG1-207ENST00000563235 RDH12Q96NR8 316 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 KIR2DL4Q99706 377 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 REG4Q9BYZ8 158 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 GTSF1LQ9H1H1 148 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 C19orf73Q9NVV2 129 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 RBFOX1Q9NWB1 397 aaKnown RBP3.94□□□□□ -1.78
SMG1-207ENST00000563235 MRPL16Q9NX20 251 aaKnown RBP3.94□□□□□ -1.78
SMG1-207ENST00000563235 SCN3BQ9NY72 215 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 A0A0A6YYD4 124 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 WDR27A2RRH5 827 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 FABP5P3A8MUU1 101 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 KRBOX1C9JBD0 128 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 COPEO14579 308 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 MPC2O95563 127 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 TTRP02766 147 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 PSG1P11464 419 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 CD99P14209 185 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 ZBTB25P24278 435 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 BLVRBP30043 206 aaPredicted RBP3.94□□□□□ -1.78
SMG1-207ENST00000563235 SPRP35270 261 aaPredicted RBP3.94□□□□□ -1.78
SMG1-207ENST00000563235 SELENOWP63302 87 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 EBPQ15125 230 aaKnown RBP3.94□□□□□ -1.78
SMG1-207ENST00000563235 H1FOOQ8IZA3 346 aaPredicted RBP3.94□□□□□ -1.78
SMG1-207ENST00000563235 SLC22A18ASQ8N1D0 253 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 BPIFB6Q8NFQ5 453 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 MRPL45Q9BRJ2 306 aaKnown RBP3.94□□□□□ -1.78
SMG1-207ENST00000563235 BAZ2AQ9UIF9 1905 aaKnown RBP3.94□□□□□ -1.78
SMG1-207ENST00000563235 LOC102725191A0A1B0GVB3 256 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 C1orf196B1AJZ1 125 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 E7EQ34 232 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 H7C1H1 209 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 J3KT08 172 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 CPMP14384 443 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 GNB3P16520 340 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 SELEP16581 610 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 SRIP30626 198 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 OR12D2P58182 307 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 RGNQ15493 299 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 FBXL22Q6P050 247 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 STAC2Q6ZMT1 411 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 FBXL14Q8N1E6 418 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 TMEM178AQ8NBL3 297 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 ZNF740Q8NDX6 193 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 OR2G2Q8NGZ5 317 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 SSC4DQ8WTU2 575 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 CMBLQ96DG6 245 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 SULT4A1Q9BR01 284 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 LXNQ9BS40 222 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 ADAT1Q9BUB4 502 aaKnown RBP3.94□□□□□ -1.78
SMG1-207ENST00000563235 OR52D1Q9H346 318 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 HEXA-AS1Q9H8Q6 139 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 CROCCQ5TZA2 2017 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 PLXND1Q9Y4D7 1925 aa3.94□□□□□ -1.78
SMG1-207ENST00000563235 TRAV30A0A087WSZ9 112 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 A8MXK9 166 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 SNURFLB1AK76 121 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 ZNF814B7Z6K7 855 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 F6UB75 175 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 NPIPB7O75200 414 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 CLDN14O95500 239 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 TDGF1P13385 188 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 CMPK1P30085 196 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 PTH2RP49190 550 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 LHX2P50458 406 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 FABP9Q0Z7S8 132 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 PMAIP1Q13794 54 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 GPR18Q14330 331 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 AVPI1Q5T686 147 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 TNFAIP8L2Q6P589 184 aaPredicted RBP3.93□□□□□ -1.78
SMG1-207ENST00000563235 Q6ZSR6 202 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 SFTPA1Q8IWL2 248 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 C8orf46Q8TAG6 207 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 SLC25A38Q96DW6 304 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 C4orf45Q96LM5 186 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 GPER1Q99527 375 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 TMEM222Q9H0R3 208 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 KCNE5Q9UJ90 142 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 TRAPPC2LQ9UL33 140 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 NCR1O76036 304 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 KBTBD11O94819 623 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 NRASP01111 189 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 OPN1SWP03999 348 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 IL3P08700 152 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 MAP2K3P46734 347 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 TFPI2P48307 235 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 CDK6Q00534 326 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 PAFAH1B3Q15102 231 aaKnown RBP3.93□□□□□ -1.78
SMG1-207ENST00000563235 ALG10Q5BKT4 473 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 ALG10BQ5I7T1 473 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 NHLRC3Q5JS37 347 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 FAM74A1Q5RGS3 127 aa3.93□□□□□ -1.78
SMG1-207ENST00000563235 GSG1LQ6UXU4 331 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms