RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 HBZP02008 142 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 CD1AP06126 327 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 FAM106CPP0CH98 169 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 FUT3P21217 361 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 MYF6P23409 242 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 MAPK3P27361 379 aaPredicted RBP9.96□□□□□ -0.82
SMAD3-208ENST00000558827 SLC35A2P78381 396 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 GNMTQ14749 295 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 HSD17B12Q53GQ0 312 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 TCTEX1D4Q5JR98 221 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 KHDC1LQ5JSQ8 128 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 IZUMO2Q6UXV1 221 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 ZNF329Q86UD4 541 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 MS4A15Q8N5U1 240 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 DTX3Q8N9I9 347 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 OR52L2PQ8NGH6 319 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 WIPF2Q8TF74 440 aaPredicted RBP9.96□□□□□ -0.82
SMAD3-208ENST00000558827 UFD1Q92890 307 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 AKR1E2Q96JD6 320 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 Q96M66 194 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 NOL4LQ96MY1 436 aaPredicted RBP9.96□□□□□ -0.82
SMAD3-208ENST00000558827 FAAP24Q9BTP7 215 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 RCC2Q9P258 522 aaKnown RBP9.96□□□□□ -0.82
SMAD3-208ENST00000558827 GNG12Q9UBI6 72 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 AK6Q9Y3D8 172 aaKnown RBP9.96□□□□□ -0.82
SMAD3-208ENST00000558827 TCRBV4S1A1TA0A5B7 111 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 FAM90A18PA6NE21 464 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 FAM90A16PA6NEW6 464 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 FAM90A20PA6NIJ5 464 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 LINC01548A6NM66 108 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 FAM90A9PA6NNJ1 464 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 FAM90A12PA8MX19 464 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 FAM90A5PA8MXJ8 464 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 OOSP1A8MZH6 123 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 HSD17B6O14756 317 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 FAM90A15PP0C7V4 464 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 FAM90A13PP0C7W8 464 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 FAM90A14PP0C7W9 464 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 FAM90A24PP0C7X0 464 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 VSIG8P0DPA2 414 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 SRMP19623 302 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 ZNF134P52741 427 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 LOXL3P58215 753 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 PAX5Q02548 391 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 OXLD1Q5BKU9 147 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 RNLSQ5VYX0 342 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 GLT8D1Q68CQ7 371 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 TMEM91Q6ZNR0 172 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 C16orf82Q7Z2V1 217 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 C6orf201Q7Z4U5 140 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 OR10A7Q8NGE5 316 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 SETD6Q8TBK2 473 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 SULT4A1Q9BR01 284 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 NICN1Q9BSH3 213 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 DUSP21Q9H596 190 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 TAF9BQ9HBM6 251 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 SPACA1Q9HBV2 294 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 MOB4Q9Y3A3 225 aa9.95□□□□□ -0.82
SMAD3-208ENST00000558827 IGHV1-3A0A0C4DH29 117 aa9.94□□□□□ -0.82
SMAD3-208ENST00000558827 NCBP2LA6PVI3 153 aaKnown RBP9.94□□□□□ -0.82
SMAD3-208ENST00000558827 SPINT2O43291 252 aa9.94□□□□□ -0.82
SMAD3-208ENST00000558827 ORC5O43913 435 aa9.94□□□□□ -0.82
SMAD3-208ENST00000558827 PDCD6O75340 191 aa9.94□□□□□ -0.82
SMAD3-208ENST00000558827 OPN1MWP04001 364 aa9.94□□□□□ -0.82
SMAD3-208ENST00000558827 GAPDHP04406 335 aaKnown RBP9.94□□□□□ -0.82
SMAD3-208ENST00000558827 OPN1MW2P0DN77 364 aa9.94□□□□□ -0.82
SMAD3-208ENST00000558827 OPN1MW3P0DN78 364 aa9.94□□□□□ -0.82
SMAD3-208ENST00000558827 HTR2CP28335 458 aa9.94□□□□□ -0.82
SMAD3-208ENST00000558827 RAB7AP51149 207 aa9.94□□□□□ -0.82
SMAD3-208ENST00000558827 CLDN12P56749 244 aa9.94□□□□□ -0.82
SMAD3-208ENST00000558827 EMX1Q04741 257 aaPredicted RBP9.94□□□□□ -0.82
SMAD3-208ENST00000558827 CT45A1Q5HYN5 189 aa9.94□□□□□ -0.82
SMAD3-208ENST00000558827 NDUFA11Q86Y39 141 aa9.94□□□□□ -0.82
SMAD3-208ENST00000558827 CDH26Q8IXH8 852 aa9.94□□□□□ -0.82
SMAD3-208ENST00000558827 NKAIN3Q8N8D7 197 aa9.94□□□□□ -0.82
SMAD3-208ENST00000558827 CT45A3Q8NHU0 189 aa9.94□□□□□ -0.82
SMAD3-208ENST00000558827 MRPL30Q8TCC3 161 aaKnown RBP9.94□□□□□ -0.82
SMAD3-208ENST00000558827 MRPS24Q96EL2 167 aaKnown RBP9.94□□□□□ -0.82
SMAD3-208ENST00000558827 NEDD4LQ96PU5 975 aa9.94□□□□□ -0.82
SMAD3-208ENST00000558827 GFI1Q99684 422 aa9.94□□□□□ -0.82
SMAD3-208ENST00000558827 UQCC2Q9BRT2 126 aa9.94□□□□□ -0.82
SMAD3-208ENST00000558827 PRKDCP78527 4128 aaKnown RBP9.93□□□□□ -0.82
SMAD3-208ENST00000558827 A0A0A6YYD4 124 aa9.93□□□□□ -0.82
SMAD3-208ENST00000558827 UCHL1P09936 223 aa9.93□□□□□ -0.82
SMAD3-208ENST00000558827 CRHBPP24387 322 aa9.93□□□□□ -0.82
SMAD3-208ENST00000558827 PPP1CCP36873 323 aaKnown RBP9.93□□□□□ -0.82
SMAD3-208ENST00000558827 CD83Q01151 205 aa9.93□□□□□ -0.82
SMAD3-208ENST00000558827 UNC119Q13432 240 aa9.93□□□□□ -0.82
SMAD3-208ENST00000558827 C1orf100Q5SVJ3 147 aa9.93□□□□□ -0.82
SMAD3-208ENST00000558827 C6orf183Q5T699 404 aa9.93□□□□□ -0.82
SMAD3-208ENST00000558827 THNSL2Q86YJ6 484 aa9.93□□□□□ -0.82
SMAD3-208ENST00000558827 OR8H3Q8N146 312 aa9.93□□□□□ -0.82
SMAD3-208ENST00000558827 EAF1Q96JC9 268 aaPredicted RBP9.93□□□□□ -0.82
SMAD3-208ENST00000558827 TMEM59Q9BXS4 323 aa9.93□□□□□ -0.82
SMAD3-208ENST00000558827 ANKRD60Q9BZ19 345 aa9.93□□□□□ -0.82
SMAD3-208ENST00000558827 CST11Q9H112 138 aa9.93□□□□□ -0.82
SMAD3-208ENST00000558827 PLGRKTQ9HBL7 147 aa9.93□□□□□ -0.82
SMAD3-208ENST00000558827 OR2S2Q9NQN1 319 aa9.93□□□□□ -0.82
SMAD3-208ENST00000558827 KCNIP1Q9NZI2 227 aa9.93□□□□□ -0.82
SMAD3-208ENST00000558827 SERPINE3A8MV23 424 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms