RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 GYPCP04921 128 aa2.38□□□□□ -2.03
SYNE2-210ENST00000553455 GUSBP08236 651 aa2.38□□□□□ -2.03
SYNE2-210ENST00000553455 PSKH1P11801 424 aa2.38□□□□□ -2.03
SYNE2-210ENST00000553455 DLX6P56179 175 aa2.38□□□□□ -2.03
SYNE2-210ENST00000553455 ZNHIT3Q15649 155 aaPredicted RBP2.38□□□□□ -2.03
SYNE2-210ENST00000553455 VN1R4Q7Z5H5 301 aa2.38□□□□□ -2.03
SYNE2-210ENST00000553455 CRLF3Q8IUI8 442 aa2.38□□□□□ -2.03
SYNE2-210ENST00000553455 OR5D18Q8NGL1 313 aa2.38□□□□□ -2.03
SYNE2-210ENST00000553455 OR4P4Q8NGL7 312 aa2.38□□□□□ -2.03
SYNE2-210ENST00000553455 ZNRF2Q8NHG8 242 aa2.38□□□□□ -2.03
SYNE2-210ENST00000553455 RAD51AP1Q96B01 352 aa2.38□□□□□ -2.03
SYNE2-210ENST00000553455 LRRC45Q96CN5 670 aa2.38□□□□□ -2.03
SYNE2-210ENST00000553455 KCNIP2Q9NS61 270 aa2.38□□□□□ -2.03
SYNE2-210ENST00000553455 MCTS1Q9ULC4 181 aaKnown RBP2.38□□□□□ -2.03
SYNE2-210ENST00000553455 OR51B4Q9Y5P0 310 aa2.38□□□□□ -2.03
SYNE2-210ENST00000553455 PLXNB1O43157 2135 aa2.38□□□□□ -2.03
SYNE2-210ENST00000553455 MROH2BQ7Z745 1585 aa2.37□□□□□ -2.03
SYNE2-210ENST00000553455 TMEM213A2RRL7 107 aa2.37□□□□□ -2.03
SYNE2-210ENST00000553455 F5H5K5 113 aa2.37□□□□□ -2.03
SYNE2-210ENST00000553455 ZNF22P17026 224 aaPredicted RBP2.37□□□□□ -2.03
SYNE2-210ENST00000553455 ACTR1BP42025 376 aa2.37□□□□□ -2.03
SYNE2-210ENST00000553455 TNFRSF9Q07011 255 aa2.37□□□□□ -2.03
SYNE2-210ENST00000553455 HENMT1Q5T8I9 393 aaKnown RBP2.37□□□□□ -2.03
SYNE2-210ENST00000553455 EBLN2Q6P2I7 272 aa2.37□□□□□ -2.03
SYNE2-210ENST00000553455 OR5AK3PQ8NH89 298 aa2.37□□□□□ -2.03
SYNE2-210ENST00000553455 SUN5Q8TC36 379 aa2.37□□□□□ -2.03
SYNE2-210ENST00000553455 SPPL2BQ8TCT7 592 aa2.37□□□□□ -2.03
SYNE2-210ENST00000553455 PPWD1Q96BP3 646 aaKnown RBP2.37□□□□□ -2.03
SYNE2-210ENST00000553455 TRNT1Q96Q11 434 aaKnown RBP2.37□□□□□ -2.03
SYNE2-210ENST00000553455 UGT2B28Q9BY64 529 aa2.37□□□□□ -2.03
SYNE2-210ENST00000553455 CHST5Q9GZS9 411 aa2.37□□□□□ -2.03
SYNE2-210ENST00000553455 NUP153P49790 1475 aaKnown RBP2.37□□□□□ -2.03
SYNE2-210ENST00000553455 PIK3R4Q99570 1358 aa2.36□□□□□ -2.03
SYNE2-210ENST00000553455 PSCAO43653 123 aa2.36□□□□□ -2.03
SYNE2-210ENST00000553455 CDK14O94921 469 aa2.36□□□□□ -2.03
SYNE2-210ENST00000553455 CDS2O95674 445 aa2.36□□□□□ -2.03
SYNE2-210ENST00000553455 CTSEP14091 401 aa2.36□□□□□ -2.03
SYNE2-210ENST00000553455 RCVRNP35243 200 aa2.36□□□□□ -2.03
SYNE2-210ENST00000553455 APOFQ13790 326 aa2.36□□□□□ -2.03
SYNE2-210ENST00000553455 KRTAP6-3Q3LI67 103 aa2.36□□□□□ -2.03
SYNE2-210ENST00000553455 PYCR3Q53H96 274 aa2.36□□□□□ -2.03
SYNE2-210ENST00000553455 CENPWQ5EE01 88 aa2.36□□□□□ -2.03
SYNE2-210ENST00000553455 SMARCD3Q6STE5 483 aa2.36□□□□□ -2.03
SYNE2-210ENST00000553455 SCXQ7RTU7 201 aa2.36□□□□□ -2.03
SYNE2-210ENST00000553455 C2orf73Q8N5S3 287 aaPredicted RBP2.36□□□□□ -2.03
SYNE2-210ENST00000553455 YIPF7Q8N8F6 280 aa2.36□□□□□ -2.03
SYNE2-210ENST00000553455 OR7G1Q8NGA0 311 aa2.36□□□□□ -2.03
SYNE2-210ENST00000553455 CCDC12Q8WUD4 166 aaPredicted RBP2.36□□□□□ -2.03
SYNE2-210ENST00000553455 ZNF251Q9BRH9 671 aa2.36□□□□□ -2.03
SYNE2-210ENST00000553455 HIGD2AQ9BW72 106 aa2.36□□□□□ -2.03
SYNE2-210ENST00000553455 DNMT1P26358 1616 aaKnown RBP2.35□□□□□ -2.03
SYNE2-210ENST00000553455 TOR1AO14656 332 aa2.35□□□□□ -2.03
SYNE2-210ENST00000553455 TOX3O15405 576 aaPredicted RBP2.35□□□□□ -2.03
SYNE2-210ENST00000553455 EEF1E1O43324 174 aaKnown RBP2.35□□□□□ -2.03
SYNE2-210ENST00000553455 ASS1P00966 412 aaKnown RBP2.35□□□□□ -2.03
SYNE2-210ENST00000553455 PSMB6P28072 239 aa2.35□□□□□ -2.03
SYNE2-210ENST00000553455 COILP38432 576 aaPredicted RBP2.35□□□□□ -2.03
SYNE2-210ENST00000553455 GTF2BQ00403 316 aa2.35□□□□□ -2.03
SYNE2-210ENST00000553455 OR8G1Q15617 311 aa2.35□□□□□ -2.03
SYNE2-210ENST00000553455 SPNS3Q6ZMD2 512 aa2.35□□□□□ -2.03
SYNE2-210ENST00000553455 BLIDQ8IZY5 108 aa2.35□□□□□ -2.03
SYNE2-210ENST00000553455 ATP6V1C2Q8NEY4 427 aa2.35□□□□□ -2.03
SYNE2-210ENST00000553455 OR10D4PQ8NGN7 298 aa2.35□□□□□ -2.03
SYNE2-210ENST00000553455 HIST1H2BAQ96A08 127 aa2.35□□□□□ -2.03
SYNE2-210ENST00000553455 OR8B2Q96RD0 313 aa2.35□□□□□ -2.03
SYNE2-210ENST00000553455 NDEL1Q9GZM8 345 aa2.35□□□□□ -2.03
SYNE2-210ENST00000553455 EURLQ9NYK6 297 aa2.35□□□□□ -2.03
SYNE2-210ENST00000553455 MTCH2Q9Y6C9 303 aa2.35□□□□□ -2.03
SYNE2-210ENST00000553455 BRD4O60885 1362 aaPredicted RBP2.35□□□□□ -2.03
SYNE2-210ENST00000553455 CFTRP13569 1480 aa2.34□□□□□ -2.03
SYNE2-210ENST00000553455 E7EQL1 145 aa2.34□□□□□ -2.03
SYNE2-210ENST00000553455 CALUO43852 315 aaPredicted RBP2.34□□□□□ -2.03
SYNE2-210ENST00000553455 OR12D1P0DN82 309 aa2.34□□□□□ -2.03
SYNE2-210ENST00000553455 PVALBP20472 110 aaPredicted RBP2.34□□□□□ -2.03
SYNE2-210ENST00000553455 DMTNQ08495 405 aa2.34□□□□□ -2.03
SYNE2-210ENST00000553455 FAM45BPQ6NSW5 357 aa2.34□□□□□ -2.03
SYNE2-210ENST00000553455 NOXRED1Q6NXP6 359 aa2.34□□□□□ -2.03
SYNE2-210ENST00000553455 TTC33Q6PID6 262 aaPredicted RBP2.34□□□□□ -2.03
SYNE2-210ENST00000553455 SPATA24Q86W54 205 aa2.34□□□□□ -2.03
SYNE2-210ENST00000553455 TAMM41Q96BW9 452 aa2.34□□□□□ -2.03
SYNE2-210ENST00000553455 GALMQ96C23 342 aa2.34□□□□□ -2.03
SYNE2-210ENST00000553455 C11orf49Q9H6J7 331 aa2.34□□□□□ -2.03
SYNE2-210ENST00000553455 LAMC3Q9Y6N6 1575 aa2.34□□□□□ -2.03
SYNE2-210ENST00000553455 SDHAF1A6NFY7 115 aa2.33□□□□□ -2.04
SYNE2-210ENST00000553455 LIN7AO14910 233 aaPredicted RBP2.33□□□□□ -2.04
SYNE2-210ENST00000553455 CYTH3O43739 400 aa2.33□□□□□ -2.04
SYNE2-210ENST00000553455 SLC25A20O43772 301 aa2.33□□□□□ -2.04
SYNE2-210ENST00000553455 PDGFRLQ15198 375 aa2.33□□□□□ -2.04
SYNE2-210ENST00000553455 PDPK2PQ6A1A2 396 aa2.33□□□□□ -2.04
SYNE2-210ENST00000553455 DOLPP1Q86YN1 238 aa2.33□□□□□ -2.04
SYNE2-210ENST00000553455 KRTAP13-1Q8IUC0 172 aa2.33□□□□□ -2.04
SYNE2-210ENST00000553455 ZFAND2AQ8N6M9 145 aa2.33□□□□□ -2.04
SYNE2-210ENST00000553455 LFNGQ8NES3 379 aa2.33□□□□□ -2.04
SYNE2-210ENST00000553455 OR5L1Q8NGL2 311 aa2.33□□□□□ -2.04
SYNE2-210ENST00000553455 OR5K1Q8NHB7 308 aa2.33□□□□□ -2.04
SYNE2-210ENST00000553455 CD200R1Q8TD46 325 aa2.33□□□□□ -2.04
SYNE2-210ENST00000553455 LMX1AQ8TE12 382 aa2.33□□□□□ -2.04
SYNE2-210ENST00000553455 GPR22Q99680 433 aa2.33□□□□□ -2.04
SYNE2-210ENST00000553455 TMEM216Q9P0N5 145 aa2.33□□□□□ -2.04
SYNE2-210ENST00000553455 CLUHO75153 1309 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms