RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 UBE2QL1A1L167 161 aa12.68□□□□□ -0.38
CHMP1A-206ENST00000549139 TRIM64CA6NLI5 447 aa12.68□□□□□ -0.38
CHMP1A-206ENST00000549139 LDLRAD4O15165 306 aa12.68□□□□□ -0.38
CHMP1A-206ENST00000549139 IGLV1-47P01700 117 aa12.68□□□□□ -0.38
CHMP1A-206ENST00000549139 CSF1P09603 554 aa12.68□□□□□ -0.38
CHMP1A-206ENST00000549139 JUNBP17275 347 aaPredicted RBP12.68□□□□□ -0.38
CHMP1A-206ENST00000549139 BLVRBP30043 206 aaPredicted RBP12.68□□□□□ -0.38
CHMP1A-206ENST00000549139 PRRX1P54821 245 aa12.68□□□□□ -0.38
CHMP1A-206ENST00000549139 OR10A3P58181 314 aa12.68□□□□□ -0.38
CHMP1A-206ENST00000549139 LRRC75BQ2VPJ9 315 aa12.68□□□□□ -0.38
CHMP1A-206ENST00000549139 LDLRAD2Q5SZI1 272 aa12.68□□□□□ -0.38
CHMP1A-206ENST00000549139 REC114Q7Z4M0 266 aa12.68□□□□□ -0.38
CHMP1A-206ENST00000549139 OR4P4Q8NGL7 312 aa12.68□□□□□ -0.38
CHMP1A-206ENST00000549139 RFESDQ8TAC1 157 aa12.68□□□□□ -0.38
CHMP1A-206ENST00000549139 CCDC107Q8WV48 283 aa12.68□□□□□ -0.38
CHMP1A-206ENST00000549139 NICN1Q9BSH3 213 aa12.68□□□□□ -0.38
CHMP1A-206ENST00000549139 ZNF286AQ9HBT8 521 aa12.68□□□□□ -0.38
CHMP1A-206ENST00000549139 RAB22AQ9UL26 194 aa12.68□□□□□ -0.38
CHMP1A-206ENST00000549139 TRAPPC2LQ9UL33 140 aa12.68□□□□□ -0.38
CHMP1A-206ENST00000549139 A0A0A6YYD4 124 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 VGLL3A8MV65 326 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 C15orf65H3BRN8 121 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 TOR1AO14656 332 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 TSPAN9O75954 239 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 OPN1MWP04001 364 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 OPN1MW2P0DN77 364 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 OPN1MW3P0DN78 364 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 GADD45AP24522 165 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 NFYBP25208 207 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 HTR1DP28221 377 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 SSTR5P35346 364 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 NKAPLQ5M9Q1 402 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 TRAT1Q6PIZ9 186 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 GDPGP1Q6ZNW5 385 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 NR2C2APQ86WQ0 139 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 DYNAPQ8N1N2 210 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 OR52M1Q8NGK5 317 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 OR4K15Q8NH41 348 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 OR9G1Q8NH87 305 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 ARL11Q969Q4 196 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 CREB3L1Q96BA8 519 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 KCTD7Q96MP8 289 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 SULT4A1Q9BR01 284 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 CHCHD6Q9BRQ6 235 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 FAAP24Q9BTP7 215 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 RAB9BQ9NP90 201 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 PLEKHJ1Q9NW61 149 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 VPREB3Q9UKI3 123 aa12.67□□□□□ -0.38
CHMP1A-206ENST00000549139 TMEM272A0A1B0GTI8 110 aa12.66□□□□□ -0.38
CHMP1A-206ENST00000549139 FAM172BPA6NC97 362 aa12.66□□□□□ -0.38
CHMP1A-206ENST00000549139 NOTOA8MTQ0 251 aa12.66□□□□□ -0.38
CHMP1A-206ENST00000549139 H3BUX3 64 aa12.66□□□□□ -0.38
CHMP1A-206ENST00000549139 SOCS1O15524 211 aa12.66□□□□□ -0.38
CHMP1A-206ENST00000549139 FAM189A2Q15884 450 aa12.66□□□□□ -0.38
CHMP1A-206ENST00000549139 SSX2Q16385 188 aa12.66□□□□□ -0.38
CHMP1A-206ENST00000549139 HLA-DRB5Q30154 266 aa12.66□□□□□ -0.38
CHMP1A-206ENST00000549139 C6orf183Q5T699 404 aa12.66□□□□□ -0.38
CHMP1A-206ENST00000549139 C6orf201Q7Z4U5 140 aa12.66□□□□□ -0.38
CHMP1A-206ENST00000549139 ZNF554Q86TJ5 538 aa12.66□□□□□ -0.38
CHMP1A-206ENST00000549139 NDNFQ8TB73 568 aa12.66□□□□□ -0.38
CHMP1A-206ENST00000549139 MBNL3Q9NUK0 354 aaKnown RBP12.66□□□□□ -0.38
CHMP1A-206ENST00000549139 DPM3Q9P2X0 92 aa12.66□□□□□ -0.38
CHMP1A-206ENST00000549139 HSF4Q9ULV5 492 aa12.66□□□□□ -0.38
CHMP1A-206ENST00000549139 FOXI3A8MTJ6 420 aaPredicted RBP12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 LEUTXA8MZ59 168 aa12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 BUB1B-PAK6H3BSN5 160 aa12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 J3QR06 171 aa12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 F2RL2O00254 374 aa12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 PAX6P26367 422 aa12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 VEGFCP49767 419 aa12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 DYNLT3P51808 116 aa12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 TMEM50BP56557 158 aa12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 TIMM50Q3ZCQ8 353 aa12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 UTF1Q5T230 341 aa12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 Q6ZTK2 550 aa12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 OR56B1Q8NGI3 324 aa12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 MRPL30Q8TCC3 161 aaKnown RBP12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 PIFOQ8TCI5 191 aa12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 PTX4Q96A99 478 aa12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 YIPF6Q96EC8 236 aa12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 LIN7BQ9HAP6 207 aa12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 PSG11Q9UQ72 335 aa12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 HILPDAQ9Y5L2 63 aa12.65□□□□□ -0.38
CHMP1A-206ENST00000549139 DNAH9Q9NYC9 4486 aa12.64□□□□□ -0.39
CHMP1A-206ENST00000549139 LOC100506127A0A0U1RQW1 187 aa12.64□□□□□ -0.39
CHMP1A-206ENST00000549139 C12orf77C9JDV5 145 aa12.64□□□□□ -0.39
CHMP1A-206ENST00000549139 LY6LH3BQJ8 138 aa12.64□□□□□ -0.39
CHMP1A-206ENST00000549139 SPINT2O43291 252 aa12.64□□□□□ -0.39
CHMP1A-206ENST00000549139 RCC1P18754 421 aaPredicted RBP12.64□□□□□ -0.39
CHMP1A-206ENST00000549139 RAB6AP20340 208 aa12.64□□□□□ -0.39
CHMP1A-206ENST00000549139 SDC2P34741 201 aa12.64□□□□□ -0.39
CHMP1A-206ENST00000549139 CEACAM3P40198 252 aa12.64□□□□□ -0.39
CHMP1A-206ENST00000549139 LOXL3P58215 753 aa12.64□□□□□ -0.39
CHMP1A-206ENST00000549139 LTC4SQ16873 150 aa12.64□□□□□ -0.39
CHMP1A-206ENST00000549139 TMEM30BQ3MIR4 351 aa12.64□□□□□ -0.39
CHMP1A-206ENST00000549139 Q3ZCU0 254 aa12.64□□□□□ -0.39
CHMP1A-206ENST00000549139 CYYR1Q96J86 154 aa12.64□□□□□ -0.39
CHMP1A-206ENST00000549139 CENPOQ9BU64 300 aa12.64□□□□□ -0.39
CHMP1A-206ENST00000549139 MMP28Q9H239 520 aa12.64□□□□□ -0.39
CHMP1A-206ENST00000549139 RIMS4Q9H426 269 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms