RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 FHITP49789 147 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 ID3Q02535 119 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 TESK1Q15569 626 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 SHEQ5VZ18 495 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 SPAG16Q8N0X2 631 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 HSD17B11Q8NBQ5 300 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 OR51H1Q8NH63 302 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 IL22RA2Q969J5 263 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 HEATR1Q9H583 2144 aaKnown RBP15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 TRAPPC2LQ9UL33 140 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 A0A0G2JRQ6 117 aa15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 TMEM50AO95807 157 aa15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 CEBPDP49716 269 aaPredicted RBP15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 ODF3L1Q8IXM7 274 aa15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 TAAR6Q96RI8 345 aa15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 PROB1E7EW31 1015 aa15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 SH2D1BO14796 132 aa15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 PSG2P11465 335 aa15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 PVALBP20472 110 aaPredicted RBP15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 HOXC12P31275 282 aa15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 CD80P33681 288 aa15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 HOXA4Q00056 320 aaPredicted RBP15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 ACSF3Q4G176 576 aaPredicted RBP15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 MOB1BQ7L9L4 216 aa15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 CXorf67Q86X51 503 aaPredicted RBP15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 ABHD14BQ96IU4 210 aa15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 PLEKHF2Q9H8W4 249 aa15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 OBP2BQ9NPH6 170 aa15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 LYRM2Q9NU23 88 aaPredicted RBP15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 TAAR3PQ9P1P4 343 aa15.66■□□□□ 0.1
PRPF40B-208ENST00000548436 TMEM210A6NLX4 147 aa15.65■□□□□ 0.1
PRPF40B-208ENST00000548436 FAM157AC9JC47 383 aa15.65■□□□□ 0.1
PRPF40B-208ENST00000548436 C1QL1O75973 258 aa15.65■□□□□ 0.1
PRPF40B-208ENST00000548436 OMGP23515 440 aa15.65■□□□□ 0.1
PRPF40B-208ENST00000548436 S100GP29377 79 aa15.65■□□□□ 0.1
PRPF40B-208ENST00000548436 NBL1P41271 181 aa15.65■□□□□ 0.1
PRPF40B-208ENST00000548436 CLINT1Q14677 625 aa15.65■□□□□ 0.1
PRPF40B-208ENST00000548436 TMEM88Q6PEY1 159 aa15.65■□□□□ 0.1
PRPF40B-208ENST00000548436 IGF2-ASQ6U949 168 aa15.65■□□□□ 0.1
PRPF40B-208ENST00000548436 ZNF826PQ6ZT77 177 aa15.65■□□□□ 0.1
PRPF40B-208ENST00000548436 C11orf53Q8IXP5 236 aa15.65■□□□□ 0.1
PRPF40B-208ENST00000548436 TMEM252Q8N6L7 170 aa15.65■□□□□ 0.1
PRPF40B-208ENST00000548436 C1orf162Q8NEQ5 155 aaPredicted RBP15.65■□□□□ 0.1
PRPF40B-208ENST00000548436 HES4Q9HCC6 221 aa15.65■□□□□ 0.1
PRPF40B-208ENST00000548436 MBNL3Q9NUK0 354 aaKnown RBP15.65■□□□□ 0.1
PRPF40B-208ENST00000548436 DKK4Q9UBT3 224 aa15.65■□□□□ 0.1
PRPF40B-208ENST00000548436 OR14J1Q9UGF5 321 aa15.65■□□□□ 0.1
PRPF40B-208ENST00000548436 CACFD1Q9UGQ2 172 aa15.65■□□□□ 0.1
PRPF40B-208ENST00000548436 PURGQ9UJV8 347 aaKnown RBP15.65■□□□□ 0.1
PRPF40B-208ENST00000548436 WDR1O75083 606 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 SFTA3P0C7M3 94 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 NPBWR1P48145 328 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 MIDNQ504T8 468 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 OR8G5Q8NG78 346 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 TMEM171Q8WVE6 324 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 PLSCR4Q9NRQ2 329 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 WIPI2Q9Y4P8 454 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 RFNGQ9Y644 331 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 WNT9BO14905 357 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 PSPNO60542 156 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 HAND1O96004 215 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 CECR9P0C854 216 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 VAMP2P63027 116 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 ZNF616Q08AN1 781 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 ZNF610Q8N9Z0 462 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 CLRN3Q8NCR9 226 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 GPR146Q96CH1 333 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 FZR1Q9UM11 496 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 RNF115Q9Y4L5 304 aa15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 CHD3Q12873 2000 aaKnown RBP15.64■□□□□ 0.09
PRPF40B-208ENST00000548436 TOR1AO14656 332 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 HSPA12AO43301 675 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 CHST1O43916 411 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 PITX3O75364 302 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 CEACAM4O75871 244 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 TNFSF13O75888 250 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 TSPAN15O95858 294 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 IGKV1-39P01597 117 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 IGKV1D-39P04432 117 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 EPHA1P21709 976 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 CAMLGP49069 296 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 DVL1P1P54792 670 aaPredicted RBP15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 OPN3Q9H1Y3 402 aaPredicted RBP15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 LUZP4Q9P127 313 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 PPP1R3CQ9UQK1 317 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 C1QTNF9BB2RNN3 333 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 SNAPINO95295 136 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 HEXAP06865 529 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 SERPINE2P07093 398 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 ACAA1P09110 424 aaPredicted RBP15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 WNT2P09544 360 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 SNCAP37840 140 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 PAX9P55771 341 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 HMGN3Q15651 99 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 IZUMO4Q1ZYL8 232 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 Q6ZR03 302 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 CBLN2Q8IUK8 224 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 SCRT1Q9BWW7 348 aa15.63■□□□□ 0.09
PRPF40B-208ENST00000548436 SLC25A31Q9H0C2 315 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms