RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 RIF1Q5UIP0 2472 aaKnown RBP2.94□□□□□ -1.94
SCAF11-210ENST00000547654 IGHV1OR15-9A0A0B4J2B8 117 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 METTL15A6NJ78 407 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 H3BP45 60 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 EIF1BO60739 113 aaKnown RBP2.94□□□□□ -1.94
SCAF11-210ENST00000547654 RBBP9O75884 186 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 OR2A4O95047 310 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 RPS17P08708 135 aaKnown RBP2.94□□□□□ -1.94
SCAF11-210ENST00000547654 PRTN3P24158 256 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 PYCR1P32322 319 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 EVI2BP34910 448 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 POLR2IP36954 125 aaKnown RBP2.94□□□□□ -1.94
SCAF11-210ENST00000547654 EIF1P41567 113 aaKnown RBP2.94□□□□□ -1.94
SCAF11-210ENST00000547654 CBX5P45973 191 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 ACTBP60709 375 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 ACTG1P63261 375 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 IL17AQ16552 155 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 AKIRIN2Q53H80 203 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 SMUG1Q53HV7 270 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 FAM78AQ5JUQ0 283 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 UBE2NLQ5JXB2 153 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 KCTD16Q68DU8 428 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 XKRXQ6PP77 449 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 LRRN1Q6UXK5 716 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 FAM231DQ6ZW35 169 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 OR4M1Q8NGD0 313 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 OR6K3Q8NGY3 331 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 LINC01006Q8NI28 216 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 BLOC1S5Q8TDH9 187 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 C15orf40Q8WUR7 153 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 RAB8BQ92930 207 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 FMC1Q96HJ9 113 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 FAM210BQ96KR6 192 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 MBOAT7Q96N66 472 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 OR2A7Q96R45 310 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 ZNF382Q96SR6 550 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 STACQ99469 402 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 CDX2Q99626 313 aaPredicted RBP2.94□□□□□ -1.94
SCAF11-210ENST00000547654 DHRS9Q9BPW9 319 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 CDCA4Q9BXL8 241 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 TBL1XR1Q9BZK7 514 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 FBXL15Q9H469 300 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 TNFRSF19Q9NS68 423 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 DDX19AQ9NUU7 478 aaKnown RBP2.94□□□□□ -1.94
SCAF11-210ENST00000547654 PSG11Q9UQ72 335 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 TP53TG1Q9Y2A0 90 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 LRRC42Q9Y546 428 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 HELZ2Q9BYK8 2649 aaKnown RBP2.94□□□□□ -1.94
SCAF11-210ENST00000547654 MYO9BQ13459 2157 aa2.94□□□□□ -1.94
SCAF11-210ENST00000547654 MN1Q10571 1320 aaPredicted RBP2.93□□□□□ -1.94
SCAF11-210ENST00000547654 NBEAQ8NFP9 2946 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 A0A0G2JMP0 313 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 A0A0X1KG70 313 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 LOC389332A0A1B0GUA5 103 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 A0A1B0GXF2 115 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 NKX2-6A6NCS4 301 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 TMEM114B3SHH9 223 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 CXCR6O00574 342 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 RTL8CO15255 209 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 SPAG7O75391 227 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 DCTN3O75935 186 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 LYPLA2O95372 231 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 IFNA6P05013 189 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 OR4Q2P0C623 313 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 CECR9P0C854 216 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 IGHV1-8P0DP01 117 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 CD79BP40259 229 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 SLCO1A2P46721 670 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 PPP1CAP62136 330 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 C4orf26Q17RF5 130 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 FBXL19-AS1Q494R0 122 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 ZNF404Q494X3 552 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 Q499Y3 187 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 SPIN4Q56A73 249 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 SLC25A30Q5SVS4 291 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 FAM162BQ5T6X4 162 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 RSBN1Q5VWQ0 802 aaPredicted RBP2.93□□□□□ -1.94
SCAF11-210ENST00000547654 GUSBP11Q6P575 273 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 ZNF530Q6P9A1 599 aaPredicted RBP2.93□□□□□ -1.94
SCAF11-210ENST00000547654 SPNS3Q6ZMD2 512 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 ZNF429Q86V71 674 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 PCP2Q8IVA1 136 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 RIBC1Q8N443 379 aaPredicted RBP2.93□□□□□ -1.94
SCAF11-210ENST00000547654 ZNF645Q8N7E2 425 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 CASTOR1Q8WTX7 329 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 CYGBQ8WWM9 190 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 CCL17Q92583 94 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 FAM104AQ969W3 186 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 OTUB2Q96DC9 234 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 ANAPC13Q9BS18 74 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 SLC22A4Q9H015 551 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 OR51E2Q9H255 320 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 MAP1LC3AQ9H492 121 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 HMG20AQ9NP66 347 aa2.93□□□□□ -1.94
SCAF11-210ENST00000547654 PTPRZ1P23471 2315 aaPredicted RBP2.93□□□□□ -1.94
SCAF11-210ENST00000547654 MTCL1Q9Y4B5 1905 aaKnown RBP2.93□□□□□ -1.94
SCAF11-210ENST00000547654 IGHV5-10-1A0A0J9YXX1 117 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 CD300LBA8K4G0 201 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 TRIM49D1C9J1S8 452 aa2.92□□□□□ -1.94
SCAF11-210ENST00000547654 PHOX2AO14813 284 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms