RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 ZG16BQ96DA0 208 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 GLRX2Q9NS18 164 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 ZNF107Q9UII5 783 aaPredicted RBP8.74□□□□□ -1.01
COL4A6-208ENST00000538570 MARCH11A6NNE9 402 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 SOCS1O15524 211 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 CXorf1O96002 111 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 VDAC1P21796 283 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 PWWP2BQ6NUJ5 590 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 C16orf82Q7Z2V1 217 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 MRGPRGQ86SM5 289 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 NRIP2Q9BQI9 281 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 PSMG3Q9BT73 122 aaPredicted RBP8.74□□□□□ -1.01
COL4A6-208ENST00000538570 METTL1Q9UBP6 276 aaKnown RBP8.74□□□□□ -1.01
COL4A6-208ENST00000538570 LRP5O75197 1615 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 CDC42EP2O14613 210 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 KLF7O75840 302 aaPredicted RBP8.74□□□□□ -1.01
COL4A6-208ENST00000538570 EWSR1Q01844 656 aaKnown RBP eCLIP8.74□□□□□ -1.01
COL4A6-208ENST00000538570 SLC25A33Q9BSK2 321 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 PRNDQ9UKY0 176 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 MYH14Q7Z406 1995 aaKnown RBP8.74□□□□□ -1.01
COL4A6-208ENST00000538570 J3KRW8 73 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 F2RL2O00254 374 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 MUC1P15941 1255 aaPredicted RBP8.74□□□□□ -1.01
COL4A6-208ENST00000538570 CLDN18P56856 261 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 FAM3BP58499 235 aaPredicted RBP8.74□□□□□ -1.01
COL4A6-208ENST00000538570 OR4X1Q8NH49 305 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 SGK494Q96LW2 274 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 IGHV1OR21-1A0A087WYE8 117 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 M0R3E3 92 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 LDLRAD4O15165 306 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 PAGE4O60829 102 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 IFITM3Q01628 133 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 CD226Q15762 336 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 FAM219AQ8IW50 185 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 FRRS1LQ9P0K9 344 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 AKAP11Q9UKA4 1901 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 HOXC4P09017 264 aaPredicted RBP8.73□□□□□ -1.01
COL4A6-208ENST00000538570 LSM6P62312 80 aaKnown RBP8.73□□□□□ -1.01
COL4A6-208ENST00000538570 LHFPL4Q7Z7J7 247 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 COL25A1Q9BXS0 654 aaPredicted RBP8.73□□□□□ -1.01
COL4A6-208ENST00000538570 TNFRSF19Q9NS68 423 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 TMEM140Q9NV12 185 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 C1RLQ9NZP8 487 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 M0R296 226 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 CD3EP07766 207 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 NMBP08949 121 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 CXCL2P19875 107 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 TMEM255AQ5JRV8 349 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 LDLRAD2Q5SZI1 272 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 SLC23A3Q6PIS1 610 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 GPBAR1Q8TDU6 330 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 VSIG4Q9Y279 399 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 ZFP30Q9Y2G7 519 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 PPYP01298 95 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 CT62P0C5K7 136 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 RAC3P60763 192 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 SSX8Q7RTT4 187 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 OR4D9Q8NGE8 314 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 ZNF48Q96MX3 618 aaPredicted RBP8.73□□□□□ -1.01
COL4A6-208ENST00000538570 NHSQ6T4R5 1651 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 A0A1W2PRD5 423 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 A0A1W2PRF3 423 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 A0A1W2PRM7 423 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 MESTQ5EB52 335 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 ASCL5Q7RTU5 278 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 MUC15Q8N387 334 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 STXBP6Q8NFX7 210 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 SNRNP40Q96DI7 357 aaKnown RBP8.73□□□□□ -1.01
COL4A6-208ENST00000538570 SF3B5Q9BWJ5 86 aaKnown RBP8.73□□□□□ -1.01
COL4A6-208ENST00000538570 SHROOM3Q8TF72 1996 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 HTN1P15515 57 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 MRPL24Q96A35 216 aaKnown RBP8.73□□□□□ -1.01
COL4A6-208ENST00000538570 CCL28Q9NRJ3 127 aa8.73□□□□□ -1.01
COL4A6-208ENST00000538570 TJP1Q07157 1748 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 COL18A1P39060 1754 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 KIR2DL1P43626 348 aaPredicted RBP8.72□□□□□ -1.01
COL4A6-208ENST00000538570 KIR2DL2P43627 348 aaPredicted RBP8.72□□□□□ -1.01
COL4A6-208ENST00000538570 CBLN3Q6UW01 205 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 LDLRAD3Q86YD5 345 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 PCOLCE2Q9UKZ9 415 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 A0A1B0GU03 582 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 GZMHP20718 246 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 FBLN7Q53RD9 439 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 OR10AC1Q8NH08 325 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 LAMA4Q16363 1823 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 A0A1W2PQD3 144 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 HOXA4Q00056 320 aaPredicted RBP8.72□□□□□ -1.01
COL4A6-208ENST00000538570 ZNF345Q14585 488 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 ZNF79Q15937 498 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 CALHM1Q8IU99 346 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 TMEM38BQ9NVV0 291 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 ZNF841Q6ZN19 808 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 C16orf47Q6ZP98 133 aaPredicted RBP8.72□□□□□ -1.01
COL4A6-208ENST00000538570 GBGT1Q8N5D6 347 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 LRRC75AQ8NAA5 344 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 ST6GALNAC3Q8NDV1 305 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 VSTM2LQ96N03 204 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 CHRNA10Q9GZZ6 450 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 SERGEFQ9UGK8 458 aa8.72□□□□□ -1.01
COL4A6-208ENST00000538570 TOGARAM1Q9Y4F4 1720 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms