RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 CEP19Q96LK0 163 aa9.8□□□□□ -0.84
CAPN1-223ENST00000533079 DERL3Q96Q80 235 aa9.8□□□□□ -0.84
CAPN1-223ENST00000533079 GON7Q9BXV9 100 aa9.8□□□□□ -0.84
CAPN1-223ENST00000533079 TTTY10Q9BZA0 68 aa9.8□□□□□ -0.84
CAPN1-223ENST00000533079 PBOV1Q9GZY1 135 aa9.8□□□□□ -0.84
CAPN1-223ENST00000533079 ZMAT4Q9H898 229 aa9.8□□□□□ -0.84
CAPN1-223ENST00000533079 ABRACLQ9P1F3 81 aa9.8□□□□□ -0.84
CAPN1-223ENST00000533079 GLS2Q9UI32 602 aa9.8□□□□□ -0.84
CAPN1-223ENST00000533079 CSMD3Q7Z407 3707 aa9.8□□□□□ -0.84
CAPN1-223ENST00000533079 SEC14L6B5MCN3 397 aa9.79□□□□□ -0.84
CAPN1-223ENST00000533079 BUB1B-PAK6H3BSN5 160 aa9.79□□□□□ -0.84
CAPN1-223ENST00000533079 MGST3O14880 152 aa9.79□□□□□ -0.84
CAPN1-223ENST00000533079 RAB3BP20337 219 aa9.79□□□□□ -0.84
CAPN1-223ENST00000533079 KIR3DL2P43630 455 aa9.79□□□□□ -0.84
CAPN1-223ENST00000533079 TEX38Q6PEX7 206 aa9.79□□□□□ -0.84
CAPN1-223ENST00000533079 ELMOD2Q8IZ81 293 aa9.79□□□□□ -0.84
CAPN1-223ENST00000533079 PARP16Q8N5Y8 322 aa9.79□□□□□ -0.84
CAPN1-223ENST00000533079 C5orf56Q8N8D9 126 aa9.79□□□□□ -0.84
CAPN1-223ENST00000533079 OR14A2Q96R54 314 aa9.79□□□□□ -0.84
CAPN1-223ENST00000533079 CITED4Q96RK1 184 aa9.79□□□□□ -0.84
CAPN1-223ENST00000533079 CCDC32Q9BV29 185 aa9.79□□□□□ -0.84
CAPN1-223ENST00000533079 MIXL1Q9H2W2 232 aa9.79□□□□□ -0.84
CAPN1-223ENST00000533079 TAS2R3Q9NYW6 316 aa9.79□□□□□ -0.84
CAPN1-223ENST00000533079 RABL2AQ9UBK7 228 aaPredicted RBP9.79□□□□□ -0.84
CAPN1-223ENST00000533079 ADAM30Q9UKF2 790 aa9.79□□□□□ -0.84
CAPN1-223ENST00000533079 OR52A1Q9UKL2 312 aa9.79□□□□□ -0.84
CAPN1-223ENST00000533079 RABL2BQ9UNT1 228 aa9.79□□□□□ -0.84
CAPN1-223ENST00000533079 V9GYS6 101 aa9.79□□□□□ -0.84
CAPN1-223ENST00000533079 STARD9Q9P2P6 4700 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 A0A087X0M5 115 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 TRGV10A0A0A0MS01 117 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 A0A1B0GX30 115 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 TMEM82A0PJX8 343 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 FUOMA2VDF0 154 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 FAM90A18PA6NE21 464 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 FAM90A16PA6NEW6 464 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 FAM90A20PA6NIJ5 464 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 FAM90A9PA6NNJ1 464 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 FAM90A12PA8MX19 464 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 FAM90A5PA8MXJ8 464 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 HAND1O96004 215 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 IGHG2P01859 326 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 FAM90A15PP0C7V4 464 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 FAM90A13PP0C7W8 464 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 FAM90A14PP0C7W9 464 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 FAM90A24PP0C7X0 464 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 OCM2P0CE71 109 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 UBCP0CG48 685 aaKnown RBP9.78□□□□□ -0.84
CAPN1-223ENST00000533079 GABRR1P24046 479 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 P2RX3P56373 397 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 SCAND1P57086 179 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 KIR2DS1Q14954 304 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 SFXN4Q6P4A7 337 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 SLC35E3Q7Z769 313 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 NR2C2APQ86WQ0 139 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 BATF2Q8N1L9 274 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 STPG2Q8N412 459 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 MINDY2Q8NBR6 621 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 CCDC54Q8NEL0 328 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 NOL4LQ96MY1 436 aaPredicted RBP9.78□□□□□ -0.84
CAPN1-223ENST00000533079 GPR173Q9NS66 373 aa9.78□□□□□ -0.84
CAPN1-223ENST00000533079 AMMECR1Q9Y4X0 333 aaPredicted RBP9.78□□□□□ -0.84
CAPN1-223ENST00000533079 LY6LH3BQJ8 138 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 J3QRK9 145 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 TOR1AO14656 332 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 RGS5O15539 181 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 UPK1BO75841 260 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 MMP23AO75900 390 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 TPPPO94811 219 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 TTRP02766 147 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 SNRNP70P08621 437 aaKnown RBP9.77□□□□□ -0.85
CAPN1-223ENST00000533079 CDK2P24941 298 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 RANBP1P43487 201 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 CDX1P47902 265 aaPredicted RBP9.77□□□□□ -0.85
CAPN1-223ENST00000533079 PRRX1P54821 245 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 FHL3Q13643 280 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 SPIN3Q5JUX0 258 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 FAM27D1Q5T7N8 215 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 PRAMEF5Q5TYX0 476 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 Q6ZSR3 168 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 ANGPTL5Q86XS5 388 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 SBSPONQ8IVN8 264 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 DRAM1Q8N682 238 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 TPRX1Q8N7U7 411 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 RNF152Q8N8N0 203 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 GDPD1Q8N9F7 314 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 OR13C5Q8NGS8 318 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 EMG1Q92979 244 aaKnown RBP9.77□□□□□ -0.85
CAPN1-223ENST00000533079 TOMM40LQ969M1 308 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 DUX3Q96PT4 197 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 ZNF286AQ9HBT8 521 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 GAR1Q9NY12 217 aaKnown RBP9.77□□□□□ -0.85
CAPN1-223ENST00000533079 MTCH1Q9NZJ7 389 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 SLC7A11Q9UPY5 501 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 V9GYH0 126 aa9.77□□□□□ -0.85
CAPN1-223ENST00000533079 FABP12A6NFH5 140 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 AIPO00170 330 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 AP4M1O00189 453 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 PSPNO60542 156 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 CD2P06729 351 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms