RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 ZP4Q12836 540 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 PLA2G2CQ5R387 149 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 DPPA3Q6W0C5 159 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 PPP1R32Q7Z5V6 425 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 BTF3L4Q96K17 158 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 OR6C3Q9NZP0 311 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 PITPNC1Q9UKF7 332 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 COL6A6A6NMZ7 2263 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 HSPB2A8KAH6 182 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 H3BQ15 152 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 IL18BPO95998 194 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 HSPB2Q16082 182 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 Q6ZN92 141 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 PINX1Q96BK5 328 aaKnown RBP8.56□□□□□ -1.04
USP35-201ENST00000526425 CYYR1Q96J86 154 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 HDHD3Q9BSH5 251 aaPredicted RBP8.56□□□□□ -1.04
USP35-201ENST00000526425 CTDSPLO15194 276 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 ZIC3O60481 467 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 HLA-GP17693 338 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 MPZP25189 248 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 RBMXP38159 391 aaKnown RBP8.56□□□□□ -1.04
USP35-201ENST00000526425 RRADP55042 308 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 CSRP2Q16527 193 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 RPUSD3Q6P087 351 aaKnown RBP8.56□□□□□ -1.04
USP35-201ENST00000526425 STXBP6Q8NFX7 210 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 IMMP1LQ96LU5 166 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 FER1L6-AS2Q96M78 137 aa8.56□□□□□ -1.04
USP35-201ENST00000526425 FAM103A1Q9BTL3 118 aaKnown RBP8.56□□□□□ -1.04
USP35-201ENST00000526425 PPP1R1AQ13522 171 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 SNAI3Q3KNW1 292 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 TDRG1Q3Y452 100 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 PHLDA2Q53GA4 152 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 ZNF738Q8NE65 137 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 APH1AQ96BI3 265 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 VAMP8Q9BV40 100 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 SLC35B3Q9H1N7 401 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 LSM5Q9Y4Y9 91 aaKnown RBP8.55□□□□□ -1.04
USP35-201ENST00000526425 EML5Q05BV3 1969 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 CD1AP06126 327 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 GLRA1P23415 457 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 ERVS71-1P61550 626 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 RAB1AP62820 205 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 SMAGPQ0VAQ4 97 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 SLAQ13239 276 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 ENDOGQ14249 297 aaKnown RBP8.55□□□□□ -1.04
USP35-201ENST00000526425 MPV17LQ2QL34 196 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 MST1LQ2TV78 715 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 SLC25A47Q6Q0C1 308 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 C1QL2Q7Z5L3 287 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 UBALD1Q8TB05 177 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 LOC102723996A0A087X1L8 192 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 A0A0U1RQV5 110 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 C21orf140B9A014 251 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 C9orf172C9J069 976 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 FTH1P19P0C7X4 201 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 SUCLG1P53597 346 aaKnown RBP8.55□□□□□ -1.04
USP35-201ENST00000526425 PMP22Q01453 160 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 LY6G6FQ5SQ64 297 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 C10orf91Q5T1B1 145 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 OR4A47Q6IF82 309 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 TUSC5Q8IXB3 177 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 TMEM123Q8N131 208 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 MRGPRDQ8TDS7 321 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 GPX8Q8TED1 209 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 SIGLEC12Q96PQ1 595 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 NIPSNAP3BQ9BS92 247 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 ANGPTL4Q9BY76 406 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 GSX1Q9H4S2 264 aaPredicted RBP8.55□□□□□ -1.04
USP35-201ENST00000526425 SLC35D1Q9NTN3 355 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 NAGKQ9UJ70 344 aa8.55□□□□□ -1.04
USP35-201ENST00000526425 K7ERU9 68 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 SRD5A2P31213 254 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 RAC3P60763 192 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.54□□□□□ -1.04
USP35-201ENST00000526425 ADAD2Q8NCV1 583 aaKnown RBP8.54□□□□□ -1.04
USP35-201ENST00000526425 OR13C8Q8NGS7 320 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 OR1P1Q8NH06 330 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 CITED1Q99966 193 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 FGF16O43320 207 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 NXPH3O95157 252 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 PMS2P2O95744 297 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 NRASP01111 189 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 HNRNPA3P51991 378 aaKnown RBP8.54□□□□□ -1.04
USP35-201ENST00000526425 SOX8P57073 446 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 GNMTQ14749 295 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 P2RY6Q15077 328 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 TSPO2Q5TGU0 170 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 SLC25A26Q70HW3 274 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 BIVMQ86UB2 503 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 ZNF429Q86V71 674 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 STPG4Q8N801 248 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 OR1F12Q8NHA8 337 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 RNF166Q96A37 237 aaPredicted RBP8.54□□□□□ -1.04
USP35-201ENST00000526425 SLC25A21Q9BQT8 299 aaPredicted RBP8.54□□□□□ -1.04
USP35-201ENST00000526425 TMEM204Q9BSN7 226 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 DEPPQ9NTK1 212 aa8.54□□□□□ -1.04
USP35-201ENST00000526425 ZNF107Q9UII5 783 aaPredicted RBP8.54□□□□□ -1.04
USP35-201ENST00000526425 PINLYPA6NC86 204 aa8.53□□□□□ -1.04
USP35-201ENST00000526425 PRR33A8MZF0 331 aa8.53□□□□□ -1.04
USP35-201ENST00000526425 RAB27BO00194 218 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms