RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 KRBOX1C9JBD0 128 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 INMT-MINDY4F8WBC2 141 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 ISLRO14498 428 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 TCF21O43680 179 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 PI15O43692 258 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 CD5LO43866 347 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 SERF1AO75920 110 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 GABARAPO95166 117 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 MT-CO2P00403 227 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 IGLV2-8P01709 118 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 AMBPP02760 352 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 HLA-DPB1P04440 258 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 OR4Q2P0C623 313 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 C1GALT1C1LP0DN25 315 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 FGF6P10767 208 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 CTLA4P16410 223 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 KRTAP5-9P26371 169 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 DIO3P55073 304 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 RAB2AP61019 212 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 FABP5Q01469 135 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 TMEM267Q0VDI3 215 aaPredicted RBP2.95□□□□□ -1.94
SKP1-209ENST00000522552 SURF2Q15527 256 aaPredicted RBP2.95□□□□□ -1.94
SKP1-209ENST00000522552 IAH1Q2TAA2 248 aaPredicted RBP2.95□□□□□ -1.94
SKP1-209ENST00000522552 DEFB115Q30KQ5 88 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 TCTEX1D4Q5JR98 221 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 HENMT1Q5T8I9 393 aaKnown RBP2.95□□□□□ -1.94
SKP1-209ENST00000522552 GLYATQ6IB77 296 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 CGB2Q6NT52 195 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 ZNF497Q6ZNH5 498 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 TMPPEQ6ZT21 453 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 ATP5L2Q7Z4Y8 100 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 NATD1Q8N6N6 113 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 UBL4BQ8N7F7 174 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 ST6GALNAC3Q8NDV1 305 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 NPBQ8NG41 125 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 TSC22D3Q99576 134 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 LITAFQ99732 161 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 ANAPC13Q9BS18 74 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 WFDC1Q9HC57 220 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 CISHQ9NSE2 258 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 ZNF780BQ9Y6R6 833 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 RFX7Q2KHR2 1363 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 SCN2AQ99250 2005 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 CEP152O94986 1710 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 TAF1LQ8IZX4 1826 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 IGKV6D-21A0A0A0MT36 114 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 IGHV3-74A0A0B4J1X5 117 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 hADV38S2A0JD32 116 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 K7EPK0 472 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 ZNF207O43670 478 aaKnown RBP2.94□□□□□ -1.94
SKP1-209ENST00000522552 ORC5O43913 435 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 COX7A2P2O60397 106 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 ADRB3P13945 408 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 GATA2P23769 480 aaPredicted RBP2.94□□□□□ -1.94
SKP1-209ENST00000522552 MP68P56378 58 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 AP1S1P61966 158 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 TMEM78Q5T7P6 136 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 AWAT2Q6E213 333 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 NANOGP8Q6NSW7 305 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 ZNF773Q6PK81 442 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 TBPL2Q6SJ96 375 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 RNF165Q6ZSG1 346 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 LINC00596Q86U02 117 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 MDP1Q86V88 176 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 Q8N377 158 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 ZNF561Q8N587 486 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 ZNF645Q8N7E2 425 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 OR1J4Q8NGS1 313 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 TWIST2Q8WVJ9 160 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 PTX4Q96A99 478 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 C12orf43Q96C57 262 aaKnown RBP2.94□□□□□ -1.94
SKP1-209ENST00000522552 ANKRD36BP1Q96IX9 119 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 ZNF778Q96MU6 729 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 PGLYRP2Q96PD5 576 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 OR7D2Q96RA2 312 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 HSD17B10Q99714 261 aaKnown RBP2.94□□□□□ -1.94
SKP1-209ENST00000522552 ALX4Q9H161 411 aaPredicted RBP2.94□□□□□ -1.94
SKP1-209ENST00000522552 LINC00597Q9H2U6 94 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 NANOGQ9H9S0 305 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 TMEM138Q9NPI0 162 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 TAS2R1Q9NYW7 299 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 NOTCH4Q99466 2003 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 DHX57Q6P158 1386 aaKnown RBP2.94□□□□□ -1.94
SKP1-209ENST00000522552 PLCH2O75038 1416 aa2.94□□□□□ -1.94
SKP1-209ENST00000522552 COL3A1P02461 1466 aaPredicted RBP2.93□□□□□ -1.94
SKP1-209ENST00000522552 SIGLEC1Q9BZZ2 1709 aa2.93□□□□□ -1.94
SKP1-209ENST00000522552 TRAV19A0A0A6YYK7 116 aa2.93□□□□□ -1.94
SKP1-209ENST00000522552 MAP1LC3B2A6NCE7 125 aa2.93□□□□□ -1.94
SKP1-209ENST00000522552 CD300LBA8K4G0 201 aa2.93□□□□□ -1.94
SKP1-209ENST00000522552 ANGPTL7O43827 346 aa2.93□□□□□ -1.94
SKP1-209ENST00000522552 SS18L1O75177 396 aaPredicted RBP2.93□□□□□ -1.94
SKP1-209ENST00000522552 IGLV2-23P01705 113 aa2.93□□□□□ -1.94
SKP1-209ENST00000522552 IGLV2-11P01706 119 aa2.93□□□□□ -1.94
SKP1-209ENST00000522552 IGHMP01871 453 aa2.93□□□□□ -1.94
SKP1-209ENST00000522552 C1QBP02746 253 aa2.93□□□□□ -1.94
SKP1-209ENST00000522552 TFPTP0C1Z6 253 aa2.93□□□□□ -1.94
SKP1-209ENST00000522552 OR10J4P0C629 311 aa2.93□□□□□ -1.94
SKP1-209ENST00000522552 T-ENOLP0DO92 83 aa2.93□□□□□ -1.94
SKP1-209ENST00000522552 KLK2P20151 261 aa2.93□□□□□ -1.94
SKP1-209ENST00000522552 CCL1P22362 96 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms