RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 CCDC107Q8WV48 283 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 C1orf147Q96MC9 270 aaPredicted RBP4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 WDFY2Q96P53 400 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 NEDD4LQ96PU5 975 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 NICN1Q9BSH3 213 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 NAA50Q9GZZ1 169 aaKnown RBP4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 ATG5Q9H1Y0 275 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 SPACA1Q9HBV2 294 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 SIRT7Q9NRC8 400 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 PLEKHJ1Q9NW61 149 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 ZNF581Q9P0T4 197 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 RAB22AQ9UL26 194 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 UBE2J1Q9Y385 318 aaPredicted RBP4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 VPS13CQ709C8 3753 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 TLN2Q9Y4G6 2542 aa4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 ZNF469Q96JG9 3925 aaPredicted RBP4.76□□□□□ -1.65
SCARNA6.1-201ENST00000516989 NF1P21359 2839 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 OTOGQ6ZRI0 2925 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 A0A075B6Q4 140 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 MEIKINA0A087WXM9 373 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 TRGV10A0A0A0MS01 117 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 TRAV39A0A0B4J263 110 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 A0A1W2PRD5 423 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 A0A1W2PRF3 423 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 A0A1W2PRM7 423 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 ODAMA1E959 279 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 GAGE12BA1L429 117 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 GAGE12HA6NDE8 117 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 METTL21EPA6NDL7 271 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 FAM90A10PA6NDY2 464 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 CCDC160A6NGH7 325 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 FAM90A8PA6NJQ4 464 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 FAM90A7PA6NKC0 464 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 MARCH11A6NNE9 402 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 FAM90A22PA8MWA6 464 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 FAM90A12PA8MX19 464 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 FAM90A23PA8MXZ1 464 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 SOCS1O15524 211 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 NOL3O60936 208 aaKnown RBP4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 CRLF1O75462 422 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 PAHP00439 452 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 FAM90A13PP0C7W8 464 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 FAM90A24PP0C7X0 464 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 ZNF728P0DKX0 622 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 SRD5A1P18405 259 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 ERP29P30040 261 aaKnown RBP4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 KCNJ3P48549 501 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 EFNB2P52799 333 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 P2RX3P56373 397 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 RPS27AP62979 156 aaKnown RBP4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 MEF2CQ06413 473 aaPredicted RBP4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 PLA2G7Q13093 441 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 FAM189A2Q15884 450 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 ZNF124Q15973 351 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 Q6ZTK2 550 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 C6orf201Q7Z4U5 140 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 VMO1Q7Z5L0 202 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 NR2C2APQ86WQ0 139 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 CROCCP3Q8IVE0 287 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 OR56B1Q8NGI3 324 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 C8orf46Q8TAG6 207 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 C22orf15Q8WYQ4 148 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 NPIPB3Q92617 1050 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 LHX4Q969G2 390 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 R3HDM4Q96D70 268 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 COQ2Q96H96 371 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 TBX15Q96SF7 602 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 FAAP24Q9BTP7 215 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 LPAR5Q9H1C0 372 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 OPN4Q9UHM6 478 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 RNF114Q9Y508 228 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 KPTNQ9Y664 436 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 SONP18583 2426 aaKnown RBP4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 AKAP9Q99996 3911 aa4.75□□□□□ -1.65
SCARNA6.1-201ENST00000516989 A0A0A6YYD4 124 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 TMEM30CPA0ZSE6 113 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 C17orf98A8MV24 154 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 M0R1W7 72 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 LDLRAD4O15165 306 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 SPRY2O43597 315 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 PDCD6O75340 191 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 GABARAPO95166 117 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 IL1AP01583 271 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 MT-ND4P03905 459 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 CSN2P05814 226 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 GLAP06280 429 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 IGHV4-38-2P0DP08 117 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 MMP9P14780 707 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 PRTN3P24158 256 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 COX7A1P24310 79 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 GLP1RP43220 463 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 PCP4P48539 62 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 RORCP51449 518 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 DLX1P56177 255 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 CTF1Q16619 201 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 LTC4SQ16873 150 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 GPR157Q5UAW9 335 aa4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 RSBN1Q5VWQ0 802 aaPredicted RBP4.74□□□□□ -1.65
SCARNA6.1-201ENST00000516989 SIGIRRQ6IA17 410 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms