RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 TRGC1P0CF51 173 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 HOXD11P31277 338 aaPredicted RBP4.32□□□□□ -1.72
PTPN13-209ENST00000511467 B2MP61769 119 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 IRF3Q14653 427 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 IER5LQ5T953 404 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 MINOS1Q5TGZ0 78 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 SFT2D1Q8WV19 159 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 DLL3Q9NYJ7 618 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 MINOS1-NBL1R4GNA1 71 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 TRAV34A0A0B4J273 112 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 CRYBB2P43320 205 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 RPS11P62280 158 aaKnown RBP eCLIP4.32□□□□□ -1.72
PTPN13-209ENST00000511467 RPL30P62888 115 aaKnown RBP4.32□□□□□ -1.72
PTPN13-209ENST00000511467 RAE1P78406 368 aaKnown RBP4.32□□□□□ -1.72
PTPN13-209ENST00000511467 HAGHQ16775 308 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 IGSF11Q5DX21 431 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 ZNF787Q6DD87 383 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 Q6ZS49 121 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 PFN4Q8NHR9 129 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 ADAMTS17Q8TE56 1095 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 CT55Q8WUE5 264 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 TMEM230Q96A57 120 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 LANCL2Q9NS86 450 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 CCDC168Q8NDH2 2452 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 BDP1A6H8Y1 2624 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 TLN1Q9Y490 2541 aaKnown RBP4.32□□□□□ -1.72
PTPN13-209ENST00000511467 IGHV1-45A0A0A0MS14 117 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 CLDN34H7C241 214 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 P2RY10O00398 339 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 MFNGO00587 321 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 NRG2O14511 850 aaPredicted RBP4.32□□□□□ -1.72
PTPN13-209ENST00000511467 COX6B1P14854 86 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 BMP5P22003 454 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 OLIG2Q13516 323 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 HES1Q14469 280 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 TMEM215Q68D42 235 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 OR2C3Q8N628 320 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 OR1L3Q8NH93 324 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 TM2D1Q9BX74 207 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 DUSP13Q9UII6 198 aa4.32□□□□□ -1.72
PTPN13-209ENST00000511467 IGKV3D-15A0A087WSY6 115 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 PQLC2LA1A4F0 135 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 MFSD2BA6NFX1 497 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 G3V3Q6 166 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 AMBPP02760 352 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 TIMP3P35625 211 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 PMCHL1Q16048 86 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 GAB4Q2WGN9 574 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 ZNF648Q5T619 568 aaPredicted RBP4.31□□□□□ -1.72
PTPN13-209ENST00000511467 STPG1Q5TH74 334 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 PCSK4Q6UW60 755 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 FRZBQ92765 325 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 KCNS1Q96KK3 526 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 PACRGQ96M98 296 aaPredicted RBP4.31□□□□□ -1.72
PTPN13-209ENST00000511467 SMIM7Q9BQ49 75 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 PRR14Q9BWN1 585 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 OR2H1Q9GZK4 316 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 MBNL1Q9NR56 388 aaKnown RBP4.31□□□□□ -1.72
PTPN13-209ENST00000511467 NTNG1Q9Y2I2 539 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 INSIG2Q9Y5U4 225 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 PTGDR2Q9Y5Y4 395 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 ZFPL1O95159 310 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 STAG3L3P0CL85 134 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 GPX4P36969 197 aaPredicted RBP4.31□□□□□ -1.72
PTPN13-209ENST00000511467 P2RX3P56373 397 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 PAX5Q02548 391 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 TMEM241Q24JQ0 296 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 NHLRC3Q5JS37 347 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 LEMD1Q68G75 181 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 Q6ZN92 141 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 MRPL52Q86TS9 123 aaKnown RBP4.31□□□□□ -1.72
PTPN13-209ENST00000511467 TGIF2LXQ8IUE1 241 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 OR2M3Q8NG83 312 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 OVOL2Q9BRP0 275 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 SSSCA1O60232 199 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 HBZP02008 142 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 FGF7P21781 194 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 CD80P33681 288 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 LIMS1P48059 325 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 SNRPD3P62318 126 aaKnown RBP4.31□□□□□ -1.72
PTPN13-209ENST00000511467 PIGFQ07326 219 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 OR8B12Q8NGG6 310 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 OR10G4Q8NGN3 311 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 PPP1R1CQ8WVI7 109 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 RNASE6Q93091 150 aaKnown RBP4.31□□□□□ -1.72
PTPN13-209ENST00000511467 OR51M1Q9H341 326 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 MRPL22Q9NWU5 206 aaKnown RBP4.31□□□□□ -1.72
PTPN13-209ENST00000511467 CCL27Q9Y4X3 112 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 C3orf85A0A1B0GTC6 90 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 HOXB5P09067 269 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 PPP1R8Q12972 351 aaKnown RBP4.31□□□□□ -1.72
PTPN13-209ENST00000511467 DHRS2Q13268 280 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 HIST1H2BAQ96A08 127 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 ZNF714Q96N38 554 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 ERRFI1Q9UJM3 462 aaPredicted RBP4.31□□□□□ -1.72
PTPN13-209ENST00000511467 C7orf66A4D0T2 115 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 CLDN14O95500 239 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 LINC00271P0C7V0 271 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 HKR1P10072 659 aa4.31□□□□□ -1.72
PTPN13-209ENST00000511467 NPY1RP25929 384 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms