RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 LRBAP50851 2863 aa7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 E9PQ18 207 aa7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 H3BP45 60 aa7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 SS18L1O75177 396 aaPredicted RBP7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 OPRM1P35372 400 aa7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 SNU13P55769 128 aaKnown RBP7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 DLK1P80370 383 aa7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 DHODHQ02127 395 aa7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 TESK1Q15569 626 aa7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 SLC25A30Q5SVS4 291 aa7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 ZNF664Q8N3J9 261 aa7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 CPEB3Q8NE35 698 aaKnown RBP7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 CSNK2A3Q8NEV1 391 aa7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 OR1K1Q8NGR3 316 aa7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 NANOS1Q8WY41 292 aaKnown RBP7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 FGGYQ96C11 551 aa7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 RAB39BQ96DA2 213 aa7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 SDSLQ96GA7 329 aa7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 OR10C1Q96KK4 312 aa7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 GNG13Q9P2W3 67 aa7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 SLC7A11Q9UPY5 501 aa7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 TIMM8BQ9Y5J9 83 aaPredicted RBP7.46□□□□□ -1.22
LIMCH1-209ENST00000509277 IGKV3D-15A0A087WSY6 115 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 LOC102725191A0A1B0GVB3 256 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 LOC107986453A0A1B0GWG9 222 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 LOC390937A0A1W2PQ73 354 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 M0R143 59 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 HOXA5P20719 270 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 PCBD1P61457 104 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 NUTF2P61970 127 aaKnown RBP7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 SNAI3Q3KNW1 292 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 PHLDA2Q53GA4 152 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 ZNF324BQ6AW86 544 aaPredicted RBP7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 AWAT2Q6E213 333 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 LPCAT3Q6P1A2 487 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 LCN15Q6UWW0 184 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 Q6ZT83 130 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 Q8WTZ3 238 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 NABP1Q96AH0 204 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 PHYHIPLQ96FC7 376 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 FAM210BQ96KR6 192 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 PRRT1Q99946 306 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 NIPSNAP3BQ9BS92 247 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 CABLES2Q9BTV7 478 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 PBOV1Q9GZY1 135 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 MRPS18AQ9NVS2 196 aaKnown RBP7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 HAO2Q9NYQ3 351 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 EHFQ9NZC4 300 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 IFITM10A6NMD0 228 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 H3BQ15 152 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 PTGER4P35408 488 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 FAM27BQ5VT28 67 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 TMEM244Q5VVB8 128 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 SLC22A25Q6T423 547 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 Q6ZVH6 145 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 OR13C8Q8NGS7 320 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 C15orf40Q8WUR7 153 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 PIGCQ92535 297 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 ABHD14AQ9BUJ0 271 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 WNT5BQ9H1J7 359 aa7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 RYDENQ9NUL5 291 aaKnown RBP7.45□□□□□ -1.22
LIMCH1-209ENST00000509277 MBD3L4A6NDZ8 208 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 MBD3L3A6NE82 208 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 MBD3L5A6NJ08 208 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 MFNGO00587 321 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 CST7O76096 145 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 FAHP16930 419 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 BDH1Q02338 343 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 ARSJQ5FYB0 599 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 TOMM20LQ6UXN7 152 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 MRPL21Q7Z2W9 205 aaKnown RBP7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 PAQR4Q8N4S7 273 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 OR8B12Q8NGG6 310 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 MBD3L2Q8NHZ7 208 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 PIGTQ969N2 578 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 ZNF2Q9BSG1 426 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 GLRX2Q9NS18 164 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 GPR173Q9NS66 373 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 ERRFI1Q9UJM3 462 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 DOCK11Q5JSL3 2073 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 LOC100289279A0A1B0GTE1 492 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 FAM230AA0A1W2PPH8 454 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 XKRY2A2RUG3 117 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 HSPB2A8KAH6 182 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 IFNA21P01568 189 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 PTTG1IPP53801 180 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 RPL23AP62750 156 aaKnown RBP7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 HSPB2Q16082 182 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 C10orf128Q5T292 105 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 ZNF429Q86V71 674 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 PRSS35Q8N3Z0 413 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 CYB561D1Q8N8Q1 229 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 TERB2Q8NHR7 220 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 TMEM45BQ96B21 275 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 FAM103A1Q9BTL3 118 aaKnown RBP7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 INPP5EQ9NRR6 644 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 ZNF319Q9P2F9 582 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 MEMO1Q9Y316 297 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 ABCA12Q86UK0 2595 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 BORCS7-ASMTA0A0B4J1R7 106 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 1218 ms