RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 TSSK6Q9BXA6 273 aa0.6□□□□□ -2.31
GYPB-209ENST00000508618 STMN3Q9NZ72 180 aa0.6□□□□□ -2.31
GYPB-209ENST00000508618 SCML1Q9UN30 329 aa0.6□□□□□ -2.31
GYPB-209ENST00000508618 WASHC3Q9Y3C0 194 aa0.6□□□□□ -2.31
GYPB-209ENST00000508618 FIS1Q9Y3D6 152 aa0.6□□□□□ -2.31
GYPB-209ENST00000508618 CHTOPQ9Y3Y2 248 aaKnown RBP0.6□□□□□ -2.31
GYPB-209ENST00000508618 TBL2Q9Y4P3 447 aaKnown RBP0.6□□□□□ -2.31
GYPB-209ENST00000508618 RTEL1-TNFRSF6BF6WH68 1400 aa0.6□□□□□ -2.31
GYPB-209ENST00000508618 GBF1Q92538 1859 aa0.6□□□□□ -2.31
GYPB-209ENST00000508618 MGAT4DA6NG13 374 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 FNDC10F2Z333 226 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 hCG_2039718K7EN88 272 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 PSMD11O00231 422 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 CDIPTO14735 213 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 FABP7O15540 132 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 SC5DO75845 299 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 IGKV5-2P06315 115 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 GPX1P07203 203 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 SPNP16150 400 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 LPAR6P43657 344 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 MP68P56378 58 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 TSPAN31Q12999 210 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 TRAM1Q15629 374 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 FAM201AQ5SY85 155 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 Q6ZT83 130 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 MRPL52Q86TS9 123 aaKnown RBP0.59□□□□□ -2.31
GYPB-209ENST00000508618 GATD1Q8NB37 220 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 FAM45AQ8TCE6 357 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 MRPS24Q96EL2 167 aaKnown RBP0.59□□□□□ -2.31
GYPB-209ENST00000508618 BCL7BQ9BQE9 202 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 PRSS27Q9BQR3 290 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 BEX2Q9BXY8 128 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 GOLPH3Q9H4A6 298 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 C11orf49Q9H6J7 331 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 NDUFB11Q9NX14 153 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 BABAM2Q9NXR7 383 aa0.59□□□□□ -2.31
GYPB-209ENST00000508618 MDC1Q14676 2089 aaKnown RBP0.59□□□□□ -2.32
GYPB-209ENST00000508618 LCTP09848 1927 aa0.59□□□□□ -2.32
GYPB-209ENST00000508618 USP42Q9H9J4 1324 aaKnown RBP0.59□□□□□ -2.32
GYPB-209ENST00000508618 MYO5BQ9ULV0 1848 aa0.59□□□□□ -2.32
GYPB-209ENST00000508618 KDM5BQ9UGL1 1544 aa0.59□□□□□ -2.32
GYPB-209ENST00000508618 RAB3GAP2Q9H2M9 1393 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 TNIKQ9UKE5 1360 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 LAMB2P55268 1798 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 IGKV1-12A0A0C4DH73 117 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 GRIFINA4D1Z8 144 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 TMEM235A6NFC5 223 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 UBFD1O14562 309 aaKnown RBP0.58□□□□□ -2.32
GYPB-209ENST00000508618 CYTH3O43739 400 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 NAPSAO96009 420 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 IGKV1D-12P01611 117 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 CRYGDP07320 174 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 CTSEP14091 401 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 ATF1P18846 271 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 CCNOP22674 350 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 RAB2AP61019 212 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 RELAQ04206 551 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 SKP2Q13309 424 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 MTERF4Q7Z6M4 381 aaKnown RBP0.58□□□□□ -2.32
GYPB-209ENST00000508618 ZBTB8OSQ8IWT0 167 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 ST13P4Q8IZP2 240 aaPredicted RBP0.58□□□□□ -2.32
GYPB-209ENST00000508618 SELENOHQ8IZQ5 122 aaKnown RBP0.58□□□□□ -2.32
GYPB-209ENST00000508618 PDCL2Q8N4E4 241 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 TRIML2Q8N7C3 387 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 ZNF283Q8N7M2 679 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 ZNF321PQ8N8H1 164 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 OR9I1Q8NGQ6 314 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 OR2Y1Q8NGV0 311 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 LHFPL5Q8TAF8 219 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 ZNF471Q9BX82 626 aaPredicted RBP0.58□□□□□ -2.32
GYPB-209ENST00000508618 C1QTNF6Q9BXI9 259 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 CYSTM1Q9H1C7 97 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 TMBIM4Q9HC24 238 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 PRO2289Q9P1D8 64 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 RABL2AQ9UBK7 228 aaPredicted RBP0.58□□□□□ -2.32
GYPB-209ENST00000508618 ALG5Q9Y673 324 aa0.58□□□□□ -2.32
GYPB-209ENST00000508618 MPDZO75970 2070 aa0.57□□□□□ -2.32
GYPB-209ENST00000508618 H3BPC8 53 aa0.57□□□□□ -2.32
GYPB-209ENST00000508618 PHYHO14832 338 aa0.57□□□□□ -2.32
GYPB-209ENST00000508618 SHOX2O60902 331 aaPredicted RBP0.57□□□□□ -2.32
GYPB-209ENST00000508618 UGT2B11O75310 529 aa0.57□□□□□ -2.32
GYPB-209ENST00000508618 PTNP21246 168 aa0.57□□□□□ -2.32
GYPB-209ENST00000508618 ATP6V0CP27449 155 aa0.57□□□□□ -2.32
GYPB-209ENST00000508618 GABRA3P34903 492 aa0.57□□□□□ -2.32
GYPB-209ENST00000508618 SLC35A2P78381 396 aa0.57□□□□□ -2.32
GYPB-209ENST00000508618 PDK2Q15119 407 aa0.57□□□□□ -2.32
GYPB-209ENST00000508618 ZBTB6Q15916 424 aa0.57□□□□□ -2.32
GYPB-209ENST00000508618 C18orf21Q32NC0 220 aaPredicted RBP0.57□□□□□ -2.32
GYPB-209ENST00000508618 BSXQ3C1V8 233 aa0.57□□□□□ -2.32
GYPB-209ENST00000508618 MRPL51Q4U2R6 128 aaKnown RBP0.57□□□□□ -2.32
GYPB-209ENST00000508618 FAM19A3Q7Z5A8 133 aa0.57□□□□□ -2.32
GYPB-209ENST00000508618 OR5K1Q8NHB7 308 aa0.57□□□□□ -2.32
GYPB-209ENST00000508618 C16orf78Q8WTQ4 265 aa0.57□□□□□ -2.32
GYPB-209ENST00000508618 RNF133Q8WVZ7 376 aa0.57□□□□□ -2.32
GYPB-209ENST00000508618 PPWD1Q96BP3 646 aaKnown RBP0.57□□□□□ -2.32
GYPB-209ENST00000508618 ZNF625Q96I27 306 aaPredicted RBP0.57□□□□□ -2.32
GYPB-209ENST00000508618 HBEGFQ99075 208 aa0.57□□□□□ -2.32
GYPB-209ENST00000508618 EBNA1BP2Q99848 306 aaKnown RBP0.57□□□□□ -2.32
GYPB-209ENST00000508618 NAA38Q9BRA0 125 aaKnown RBP0.57□□□□□ -2.32
GYPB-209ENST00000508618 UGT2B28Q9BY64 529 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms