RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 FAM83FQ8NEG4 500 aaPredicted RBP4.03□□□□□ -1.76
NIPBL-205ENST00000505998 OR10A7Q8NGE5 316 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 NEIL3Q8TAT5 605 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 ZFAND1Q8TCF1 268 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 SLC7A13Q8TCU3 470 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 CANT1Q8WVQ1 401 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 TMEM234Q8WY98 164 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 CCDC124Q96CT7 223 aaKnown RBP4.03□□□□□ -1.76
NIPBL-205ENST00000505998 ZHX1-C8orf76Q96EF9 292 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 PHYHIPLQ96FC7 376 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 UGT2B28Q9BY64 529 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 GABARAPL1Q9H0R8 117 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 DSN1Q9H410 356 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 PTGES2Q9H7Z7 377 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 SPRR3Q9UBC9 169 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 CHRNA9Q9UGM1 479 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 RIMS3Q9UJD0 308 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 RPH3ALQ9UNE2 315 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 TRAPPC4Q9Y296 219 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 ALG5Q9Y673 324 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 HSPE1-MOB4S4R3N1 261 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 DIDO1Q9BTC0 2240 aaKnown RBP4.03□□□□□ -1.76
NIPBL-205ENST00000505998 ANKHD1Q8IWZ3 2542 aaKnown RBP4.02□□□□□ -1.77
NIPBL-205ENST00000505998 SPTAN1Q13813 2472 aaKnown RBP4.02□□□□□ -1.77
NIPBL-205ENST00000505998 IGLV8-61A0A075B6I0 122 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 A0A087WUU8 490 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 A0A087WXM4 84 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 OR2AT4A6NND4 320 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 KRBOX1C9JBD0 128 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 H7C2Y5 167 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 F10P00742 488 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 FABP3P05413 133 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 CRYGCP07315 174 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 IFI30P13284 250 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 RPA2P15927 270 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 ZNF19P17023 458 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 SERPINA2P20848 420 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 CD40LGP29965 261 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 MAGEA5P43359 124 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 POLR2HP52434 150 aaKnown RBP4.02□□□□□ -1.77
NIPBL-205ENST00000505998 ST3GAL3Q11203 375 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 FOXF1Q12946 379 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 OR1Q1Q15612 314 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 ATP6AP1Q15904 470 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 NDUFAF6Q330K2 333 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 OR2B11Q5JQS5 317 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 RBM45Q8IUH3 476 aaKnown RBP4.02□□□□□ -1.77
NIPBL-205ENST00000505998 STX19Q8N4C7 294 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 LINC00471Q8N535 108 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 CLDN22Q8N7P3 220 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 ST6GALNAC3Q8NDV1 305 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 OR52M1Q8NGK5 317 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 TRMT10AQ8TBZ6 339 aaKnown RBP4.02□□□□□ -1.77
NIPBL-205ENST00000505998 ACOT11Q8WXI4 607 aaPredicted RBP4.02□□□□□ -1.77
NIPBL-205ENST00000505998 OR5B2Q96R09 309 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 GPX7Q96SL4 187 aaPredicted RBP4.02□□□□□ -1.77
NIPBL-205ENST00000505998 MCHR1Q99705 422 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 EXO5Q9H790 373 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 NIPAL2Q9H841 368 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 RNF122Q9H9V4 155 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 NMNAT1Q9HAN9 279 aaPredicted RBP4.02□□□□□ -1.77
NIPBL-205ENST00000505998 NIT2Q9NQR4 276 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 MED11Q9P086 117 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 COPZ2Q9P299 210 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 MYEF2Q9P2K5 600 aaKnown RBP4.02□□□□□ -1.77
NIPBL-205ENST00000505998 CLCF1Q9UBD9 225 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 STARD10Q9Y365 291 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 HDGFL3Q9Y3E1 203 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 FLVCR1Q9Y5Y0 555 aa4.02□□□□□ -1.77
NIPBL-205ENST00000505998 MYO7BQ6PIF6 2116 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 PTPN13Q12923 2485 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 TMED7-TICAM2A0A0A6YYA0 188 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 A0A0A6YYH2 397 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 TRGV5A0A0B4J1U4 118 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 A6NJ64 397 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 G3V2T6 193 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 H3BMQ9 156 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 BCKDKO14874 412 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 OR2T1O43869 369 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 GATBO75879 557 aaKnown RBP4.01□□□□□ -1.77
NIPBL-205ENST00000505998 IGHMP01871 453 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 BGLAPP02818 100 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 ASAH2BP0C7U1 165 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 GKN3PP0CG01 181 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 OR8G3PP0DMU2 310 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 GPR4P46093 362 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 OR1E2P47887 323 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 RFX3P48380 749 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 IDH2P48735 452 aaKnown RBP4.01□□□□□ -1.77
NIPBL-205ENST00000505998 CDC34P49427 236 aaPredicted RBP4.01□□□□□ -1.77
NIPBL-205ENST00000505998 SRP9P49458 86 aaKnown RBP4.01□□□□□ -1.77
NIPBL-205ENST00000505998 RGS6P49758 472 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 RBP2P50120 134 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 ZNF133P52736 654 aaPredicted RBP4.01□□□□□ -1.77
NIPBL-205ENST00000505998 UGT2B15P54855 530 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 TMBIM6P55061 237 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 AQP4P55087 323 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 FXYD6P3P58550 94 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 NUTF2P61970 127 aaKnown RBP4.01□□□□□ -1.77
NIPBL-205ENST00000505998 ERVK-25P63136 954 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms