RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 RHOXF1Q8NHV9 184 aa8.73□□□□□ -1.01
UBE2D3-219ENST00000505207 C4orf3Q8WVX3 66 aa8.73□□□□□ -1.01
UBE2D3-219ENST00000505207 RTN4IP1Q8WWV3 396 aaPredicted RBP8.73□□□□□ -1.01
UBE2D3-219ENST00000505207 PYDC1Q8WXC3 89 aa8.73□□□□□ -1.01
UBE2D3-219ENST00000505207 DUX3Q96PT4 197 aa8.73□□□□□ -1.01
UBE2D3-219ENST00000505207 S1PR3Q99500 378 aa8.73□□□□□ -1.01
UBE2D3-219ENST00000505207 MRPS18AQ9NVS2 196 aaKnown RBP8.73□□□□□ -1.01
UBE2D3-219ENST00000505207 TAS2R4Q9NYW5 299 aa8.73□□□□□ -1.01
UBE2D3-219ENST00000505207 GNG12Q9UBI6 72 aa8.73□□□□□ -1.01
UBE2D3-219ENST00000505207 CKLFQ9UBR5 152 aa8.73□□□□□ -1.01
UBE2D3-219ENST00000505207 TRAPPC2LQ9UL33 140 aa8.73□□□□□ -1.01
UBE2D3-219ENST00000505207 DNAH3Q8TD57 4116 aa8.73□□□□□ -1.01
UBE2D3-219ENST00000505207 IRGMA1A4Y4 181 aa8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 LINC01548A6NM66 108 aa8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 E9PI62 339 aa8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 C3orf84H3BNL1 204 aa8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 C15orf65H3BRN8 121 aa8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 AIPO00170 330 aa8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 GEMIN2O14893 280 aaKnown RBP8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 CDRT1O95170 752 aa8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 IGHG4P01861 327 aa8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 MT-ND4P03905 459 aa8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 SERPINA2P20848 420 aa8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 CBR4Q8N4T8 237 aa8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 OR52I1Q8NGK6 324 aa8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 CCDC107Q8WV48 283 aa8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 ST6GALNAC6Q969X2 333 aa8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 TMEM106AQ96A25 262 aa8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 MRPS24Q96EL2 167 aaKnown RBP8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 C9orf16Q9BUW7 83 aa8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 AMBNQ9NP70 447 aa8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 ZNF580Q9UK33 172 aa8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 ERGIC3Q9Y282 383 aa8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 LSM4Q9Y4Z0 139 aaKnown RBP8.72□□□□□ -1.01
UBE2D3-219ENST00000505207 DYNC1I1O14576 645 aa8.71□□□□□ -1.02
UBE2D3-219ENST00000505207 CA11O75493 328 aa8.71□□□□□ -1.02
UBE2D3-219ENST00000505207 IGF1P05019 195 aa8.71□□□□□ -1.02
UBE2D3-219ENST00000505207 OR8U8P0C7N1 319 aa8.71□□□□□ -1.02
UBE2D3-219ENST00000505207 GABRB1P18505 474 aa8.71□□□□□ -1.02
UBE2D3-219ENST00000505207 LUMP51884 338 aaPredicted RBP8.71□□□□□ -1.02
UBE2D3-219ENST00000505207 MED21Q13503 144 aa8.71□□□□□ -1.02
UBE2D3-219ENST00000505207 RIPK1Q13546 671 aa8.71□□□□□ -1.02
UBE2D3-219ENST00000505207 ZNF260Q3ZCT1 412 aa8.71□□□□□ -1.02
UBE2D3-219ENST00000505207 SLC22A6Q4U2R8 563 aa8.71□□□□□ -1.02
UBE2D3-219ENST00000505207 ZNF497Q6ZNH5 498 aa8.71□□□□□ -1.02
UBE2D3-219ENST00000505207 SLC25A48Q6ZT89 311 aaKnown RBP8.71□□□□□ -1.02
UBE2D3-219ENST00000505207 TMEM104Q8NE00 496 aa8.71□□□□□ -1.02
UBE2D3-219ENST00000505207 PRR25Q96S07 402 aa8.71□□□□□ -1.02
UBE2D3-219ENST00000505207 PLSCR3Q9NRY6 295 aa8.71□□□□□ -1.02
UBE2D3-219ENST00000505207 KCNIP1Q9NZI2 227 aa8.71□□□□□ -1.02
UBE2D3-219ENST00000505207 ZNF107Q9UII5 783 aaPredicted RBP8.71□□□□□ -1.02
UBE2D3-219ENST00000505207 ZNF256Q9Y2P7 627 aaPredicted RBP8.71□□□□□ -1.02
UBE2D3-219ENST00000505207 LOC100130705A0A1B0GUX0 176 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 LANCL1O43813 399 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 LY86O95711 162 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 GLAP06280 429 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 MYL12AP19105 171 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 DCKP27707 260 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 CHATP28329 748 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 GTF2A1P52655 376 aaPredicted RBP8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 ZNF137PP52743 207 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 DEFB136Q30KP8 78 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 FAM27D1Q5T7N8 215 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 SYT6Q5T7P8 510 aaPredicted RBP8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 FAM71E2Q8N5Q1 922 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 OR11H1Q8NG94 326 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 UBE2E2Q96LR5 201 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 KCTD7Q96MP8 289 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 FGF20Q9NP95 211 aaPredicted RBP8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 PGPEP1Q9NXJ5 209 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 BABAM2Q9NXR7 383 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 ETAA1Q9NY74 926 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 AASSQ9UDR5 926 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 VSIG4Q9Y279 399 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 SMAD5-AS1Q9Y6J3 95 aa8.7□□□□□ -1.02
UBE2D3-219ENST00000505207 IGHV3-43A0A0B4J1X8 118 aa8.69□□□□□ -1.02
UBE2D3-219ENST00000505207 RGS11O94810 467 aa8.69□□□□□ -1.02
UBE2D3-219ENST00000505207 LIMS3P0CW19 117 aa8.69□□□□□ -1.02
UBE2D3-219ENST00000505207 LIMS4P0CW20 117 aa8.69□□□□□ -1.02
UBE2D3-219ENST00000505207 IGHV3-43DP0DP04 118 aa8.69□□□□□ -1.02
UBE2D3-219ENST00000505207 PSMB8P28062 276 aa8.69□□□□□ -1.02
UBE2D3-219ENST00000505207 MMDQ15546 238 aa8.69□□□□□ -1.02
UBE2D3-219ENST00000505207 ZNF554Q86TJ5 538 aa8.69□□□□□ -1.02
UBE2D3-219ENST00000505207 ZNF429Q86V71 674 aa8.69□□□□□ -1.02
UBE2D3-219ENST00000505207 CDH26Q8IXH8 852 aa8.69□□□□□ -1.02
UBE2D3-219ENST00000505207 ZNF555Q8NEP9 628 aa8.69□□□□□ -1.02
UBE2D3-219ENST00000505207 OR1N2Q8NGR9 330 aa8.69□□□□□ -1.02
UBE2D3-219ENST00000505207 SMIM19Q96E16 107 aa8.69□□□□□ -1.02
UBE2D3-219ENST00000505207 ZNF184Q99676 751 aaPredicted RBP8.69□□□□□ -1.02
UBE2D3-219ENST00000505207 ZNF251Q9BRH9 671 aa8.69□□□□□ -1.02
UBE2D3-219ENST00000505207 GHITMQ9H3K2 345 aa8.69□□□□□ -1.02
UBE2D3-219ENST00000505207 SCOCQ9UIL1 159 aa8.69□□□□□ -1.02
UBE2D3-219ENST00000505207 LRRC42Q9Y546 428 aa8.69□□□□□ -1.02
UBE2D3-219ENST00000505207 FAM90A10PA6NDY2 464 aa8.68□□□□□ -1.02
UBE2D3-219ENST00000505207 FAM90A7PA6NKC0 464 aa8.68□□□□□ -1.02
UBE2D3-219ENST00000505207 FAM90A23PA8MXZ1 464 aa8.68□□□□□ -1.02
UBE2D3-219ENST00000505207 C12orf77C9JDV5 145 aa8.68□□□□□ -1.02
UBE2D3-219ENST00000505207 OGG1O15527 345 aa8.68□□□□□ -1.02
UBE2D3-219ENST00000505207 GPX5O75715 221 aa8.68□□□□□ -1.02
UBE2D3-219ENST00000505207 HBZP02008 142 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms