RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 AIPO00170 330 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 SDCBPO00560 298 aaPredicted RBP10□□□□□ -0.81
HSPG2-212ENST00000493940 ORC5O43913 435 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 OPN1MWP04001 364 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 OPN1MW2P0DN77 364 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 OPN1MW3P0DN78 364 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 SRMP19623 302 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 CRHBPP24387 322 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 HTR2CP28335 458 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 GPR176Q14439 515 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 GNMTQ14749 295 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 BEAN1Q3B7T3 259 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 C16orf82Q7Z2V1 217 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 THNSL2Q86YJ6 484 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 OR10V1Q8NGI7 309 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 MRPL30Q8TCC3 161 aaKnown RBP10□□□□□ -0.81
HSPG2-212ENST00000493940 NEK7Q8TDX7 302 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 MYDGFQ969H8 173 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 SULT4A1Q9BR01 284 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 NICN1Q9BSH3 213 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 ANKRD60Q9BZ19 345 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 ETAA1Q9NY74 926 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 LINC00527Q9UJ94 153 aa10□□□□□ -0.81
HSPG2-212ENST00000493940 IGHV1-3A0A0C4DH29 117 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 OOSP1A8MZH6 123 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 MCRIP1C9JLW8 97 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 MPIG6BO95866 241 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 HBZP02008 142 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 UCHL1P09936 223 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 FUT3P21217 361 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 CHATP28329 748 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 PLA2G7Q13093 441 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 MADCAM1Q13477 382 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 TPBGQ13641 420 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 EBI3Q14213 229 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 OXLD1Q5BKU9 147 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 C9orf152Q5JTZ5 239 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 SAMD5Q5TGI4 173 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 SLC16A12Q6ZSM3 486 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 PRR18Q8N4B5 295 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 MS4A15Q8N5U1 240 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 LINC00311Q8N616 119 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 C5orf56Q8N8D9 126 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 OR52L2PQ8NGH6 319 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 OR52M1Q8NGK5 317 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 CREB3L1Q96BA8 519 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 MRPS24Q96EL2 167 aaKnown RBP9.99□□□□□ -0.81
HSPG2-212ENST00000493940 NOL4LQ96MY1 436 aaPredicted RBP9.99□□□□□ -0.81
HSPG2-212ENST00000493940 UQCC2Q9BRT2 126 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 FAAP24Q9BTP7 215 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 VCXQ9H320 206 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 PLSCR3Q9NRY6 295 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 MBNL3Q9NUK0 354 aaKnown RBP9.99□□□□□ -0.81
HSPG2-212ENST00000493940 TRAPPC2LQ9UL33 140 aa9.99□□□□□ -0.81
HSPG2-212ENST00000493940 SHISA3A0PJX4 238 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 TMEM14DPA8MWL7 114 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 HSD17B6O14756 317 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 IGKV1D-33P01593 117 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 IGKV1-33P01594 117 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 MNDAP41218 407 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 FABP5Q01469 135 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 ZNF816Q0VGE8 651 aaPredicted RBP9.98□□□□□ -0.81
HSPG2-212ENST00000493940 GPR50Q13585 617 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 ARSJQ5FYB0 599 aaPredicted RBP9.98□□□□□ -0.81
HSPG2-212ENST00000493940 RBM48Q5RL73 367 aaKnown RBP9.98□□□□□ -0.81
HSPG2-212ENST00000493940 IZUMO2Q6UXV1 221 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 SLC25A48Q6ZT89 311 aaKnown RBP9.98□□□□□ -0.81
HSPG2-212ENST00000493940 C18orf65Q6ZTR6 163 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 C6orf201Q7Z4U5 140 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 CENPVQ7Z7K6 275 aaPredicted RBP9.98□□□□□ -0.81
HSPG2-212ENST00000493940 ZNF329Q86UD4 541 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 NDUFA11Q86Y39 141 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 ODF3L1Q8IXM7 274 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 Q8N6K4 173 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 OR10X1Q8NGY0 326 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 R3HDM4Q96D70 268 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 EAF1Q96JC9 268 aaPredicted RBP9.98□□□□□ -0.81
HSPG2-212ENST00000493940 TAF9BQ9HBM6 251 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 PCDHB16Q9NRJ7 776 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 SCN3BQ9NY72 215 aa9.98□□□□□ -0.81
HSPG2-212ENST00000493940 FAM90A10PA6NDY2 464 aa9.97□□□□□ -0.81
HSPG2-212ENST00000493940 FAM90A7PA6NKC0 464 aa9.97□□□□□ -0.81
HSPG2-212ENST00000493940 FAM90A23PA8MXZ1 464 aa9.97□□□□□ -0.81
HSPG2-212ENST00000493940 CCRL2O00421 344 aa9.97□□□□□ -0.81
HSPG2-212ENST00000493940 SLC22A1O15245 554 aa9.97□□□□□ -0.81
HSPG2-212ENST00000493940 SOCS1O15524 211 aa9.97□□□□□ -0.81
HSPG2-212ENST00000493940 RGS10O43665 173 aa9.97□□□□□ -0.81
HSPG2-212ENST00000493940 PDCD6O75340 191 aa9.97□□□□□ -0.81
HSPG2-212ENST00000493940 FAM106CPP0CH98 169 aa9.97□□□□□ -0.81
HSPG2-212ENST00000493940 HSMCR30P0CW71 290 aa9.97□□□□□ -0.81
HSPG2-212ENST00000493940 TMEM11P17152 192 aa9.97□□□□□ -0.81
HSPG2-212ENST00000493940 RAB7AP51149 207 aa9.97□□□□□ -0.81
HSPG2-212ENST00000493940 F2RL1P55085 397 aa9.97□□□□□ -0.81
HSPG2-212ENST00000493940 TMEM50BP56557 158 aa9.97□□□□□ -0.81
HSPG2-212ENST00000493940 RPS27AP62979 156 aaKnown RBP9.97□□□□□ -0.81
HSPG2-212ENST00000493940 HES1Q14469 280 aa9.97□□□□□ -0.81
HSPG2-212ENST00000493940 P2RY14Q15391 338 aa9.97□□□□□ -0.81
HSPG2-212ENST00000493940 SSX1Q16384 188 aa9.97□□□□□ -0.81
HSPG2-212ENST00000493940 MORN2Q502X0 79 aa9.97□□□□□ -0.81
HSPG2-212ENST00000493940 HSD17B12Q53GQ0 312 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms