RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 AP4S1Q9Y587 144 aa10.61□□□□□ -0.71
SAMM50-204ENST00000493161 OVOL1O14753 267 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 ATP6V0E1O15342 81 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 SAP30O75446 220 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 OR7C1O76099 320 aaPredicted RBP10.6□□□□□ -0.71
SAMM50-204ENST00000493161 IGLV1-40P01703 118 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 MT-ND4P03905 459 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 RAB3AP20336 220 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 CNTFRP26992 372 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 SOX2P48431 317 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 SLURP1P55000 103 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 RBM11P57052 281 aaKnown RBP10.6□□□□□ -0.71
SAMM50-204ENST00000493161 RUNX1Q01196 453 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 CT45A1Q5HYN5 189 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 FAM27D1Q5T7N8 215 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 TMEM65Q6PI78 240 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 ADAMTSL5Q6ZMM2 481 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 SLC25A48Q6ZT89 311 aaKnown RBP10.6□□□□□ -0.71
SAMM50-204ENST00000493161 ZNF429Q86V71 674 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 OR8H1Q8NGG4 311 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 OR10V1Q8NGI7 309 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 OR5AK2Q8NH90 309 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 CT45A3Q8NHU0 189 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 TSEN15Q8WW01 171 aaKnown RBP10.6□□□□□ -0.71
SAMM50-204ENST00000493161 CITED4Q96RK1 184 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 ALG8Q9BVK2 526 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 IFT22Q9H7X7 185 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 TAS2R4Q9NYW5 299 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 ZNF580Q9UK33 172 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 ING4Q9UNL4 249 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 VSIG4Q9Y279 399 aa10.6□□□□□ -0.71
SAMM50-204ENST00000493161 A0A1W2PP11 408 aa10.59□□□□□ -0.71
SAMM50-204ENST00000493161 SAC3D1A6NKF1 404 aa10.59□□□□□ -0.71
SAMM50-204ENST00000493161 C12orf77C9JDV5 145 aa10.59□□□□□ -0.71
SAMM50-204ENST00000493161 GP9P14770 177 aa10.59□□□□□ -0.71
SAMM50-204ENST00000493161 IL3RAP26951 378 aa10.59□□□□□ -0.71
SAMM50-204ENST00000493161 RAB9AP51151 201 aa10.59□□□□□ -0.71
SAMM50-204ENST00000493161 GALEQ14376 348 aa10.59□□□□□ -0.71
SAMM50-204ENST00000493161 MMDQ15546 238 aa10.59□□□□□ -0.71
SAMM50-204ENST00000493161 SLC25A30Q5SVS4 291 aa10.59□□□□□ -0.71
SAMM50-204ENST00000493161 ATAD3CQ5T2N8 411 aa10.59□□□□□ -0.71
SAMM50-204ENST00000493161 ZNF497Q6ZNH5 498 aa10.59□□□□□ -0.71
SAMM50-204ENST00000493161 C5orf24Q7Z6I8 188 aa10.59□□□□□ -0.71
SAMM50-204ENST00000493161 OR52N1Q8NH53 320 aa10.59□□□□□ -0.71
SAMM50-204ENST00000493161 CASTOR1Q8WTX7 329 aa10.59□□□□□ -0.71
SAMM50-204ENST00000493161 ORAI1Q96D31 301 aa10.59□□□□□ -0.71
SAMM50-204ENST00000493161 IMPAD1Q9NX62 359 aa10.59□□□□□ -0.71
SAMM50-204ENST00000493161 SORL1Q92673 2214 aa10.58□□□□□ -0.72
SAMM50-204ENST00000493161 CSMD3Q7Z407 3707 aa10.58□□□□□ -0.72
SAMM50-204ENST00000493161 LYSTQ99698 3801 aa10.58□□□□□ -0.72
SAMM50-204ENST00000493161 IGHV7-81A0A0B4J1V7 117 aa10.58□□□□□ -0.72
SAMM50-204ENST00000493161 FAM90A10PA6NDY2 464 aa10.58□□□□□ -0.72
SAMM50-204ENST00000493161 TMEM212A6NML5 194 aa10.58□□□□□ -0.72
SAMM50-204ENST00000493161 ORC5O43913 435 aa10.58□□□□□ -0.72
SAMM50-204ENST00000493161 OR5H8P0DN80 308 aa10.58□□□□□ -0.72
SAMM50-204ENST00000493161 GTF2A1P52655 376 aaPredicted RBP10.58□□□□□ -0.72
SAMM50-204ENST00000493161 ZNF137PP52743 207 aa10.58□□□□□ -0.72
SAMM50-204ENST00000493161 SNRPGP62308 76 aaKnown RBP10.58□□□□□ -0.72
SAMM50-204ENST00000493161 GABPB1Q06547 395 aaPredicted RBP10.58□□□□□ -0.72
SAMM50-204ENST00000493161 LSAMPQ13449 338 aa10.58□□□□□ -0.72
SAMM50-204ENST00000493161 SRSF7Q16629 238 aaKnown RBP eCLIP10.58□□□□□ -0.72
SAMM50-204ENST00000493161 NHLRC3Q5JS37 347 aa10.58□□□□□ -0.72
SAMM50-204ENST00000493161 SYS1Q8N2H4 156 aa10.58□□□□□ -0.72
SAMM50-204ENST00000493161 OR1L1Q8NH94 360 aa10.58□□□□□ -0.72
SAMM50-204ENST00000493161 TRUB1Q8WWH5 349 aaKnown RBP10.58□□□□□ -0.72
SAMM50-204ENST00000493161 JAM3Q9BX67 310 aa10.58□□□□□ -0.72
SAMM50-204ENST00000493161 OR51J1Q9H342 316 aa10.58□□□□□ -0.72
SAMM50-204ENST00000493161 ZMAT4Q9H898 229 aa10.58□□□□□ -0.72
SAMM50-204ENST00000493161 PARP11Q9NR21 331 aa10.58□□□□□ -0.72
SAMM50-204ENST00000493161 TRAV41A0A0B4J266 112 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 MAGEA13PA6NCF6 341 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 AIPO00170 330 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 MAGEB3O15480 346 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 SOX15O60248 233 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 SERPINA2P20848 420 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 BLVRBP30043 206 aaPredicted RBP10.57□□□□□ -0.72
SAMM50-204ENST00000493161 ADARB1P78563 741 aaKnown RBP10.57□□□□□ -0.72
SAMM50-204ENST00000493161 ZIK1Q3SY52 487 aaPredicted RBP10.57□□□□□ -0.72
SAMM50-204ENST00000493161 XAF1Q6GPH4 301 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 HAPLN4Q86UW8 402 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 PRR18Q8N4B5 295 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 MINDY2Q8NBR6 621 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 OR4K15Q8NH41 348 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 NEK7Q8TDX7 302 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 ARPC1AQ92747 370 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 TM2D3Q9BRN9 247 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 ANKRD60Q9BZ19 345 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 METTL9Q9H1A3 318 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 EDA2RQ9HAV5 297 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 AMBNQ9NP70 447 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 TPSG1Q9NRR2 321 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 IL36GQ9NZH8 169 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 GNG12Q9UBI6 72 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 FBXO7Q9Y3I1 522 aa10.57□□□□□ -0.72
SAMM50-204ENST00000493161 IGHV4OR15-8A0A075B7B6 117 aa10.56□□□□□ -0.72
SAMM50-204ENST00000493161 A0A087WW49 117 aa10.56□□□□□ -0.72
SAMM50-204ENST00000493161 TXNL1O43396 289 aa10.56□□□□□ -0.72
SAMM50-204ENST00000493161 LANCL1O43813 399 aa10.56□□□□□ -0.72
SAMM50-204ENST00000493161 RPSAP08865 295 aaKnown RBP10.56□□□□□ -0.72
SAMM50-204ENST00000493161 ACTBP60709 375 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms