RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 P2RX1P51575 399 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 CDKN2DP55273 166 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 UBE2NP61088 152 aaKnown RBP3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 MAXP61244 160 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 RAP1AP62834 184 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 ZNF791Q3KP31 576 aaPredicted RBP3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 TSPO2Q5TGU0 170 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 CEMP1Q6PRD7 247 aaPredicted RBP3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 BRD3OSQ6XYD6 125 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 TIFABQ6ZNK6 161 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 SSX8Q7RTT4 187 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 LINC00523Q86TU6 105 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 APRG1Q8IVJ8 170 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 NELFCDQ8IXH7 590 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 ZCCHC24Q8N2G6 241 aaKnown RBP3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 ARRDC1Q8N5I2 433 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 TMEM104Q8NE00 496 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 OR52K1Q8NGK4 314 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 OR6Q1Q8NGQ2 317 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 FRZBQ92765 325 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 RAB1CQ92928 201 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 NRBF2Q96F24 287 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 SLC25A39Q9BZJ4 359 aaPredicted RBP3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 IL22Q9GZX6 179 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 CHCHD2Q9Y6H1 151 aaPredicted RBP3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 TANC2Q9HCD6 1990 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 IGHV3-66A0A0C4DH42 116 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 ATP6V1G2-DDX39BF2Z307 99 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 RNASEK-C17orf49H0YIS7 233 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 M0R1B8 84 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 XRCC2O43543 280 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 MPDU1O75352 247 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 ENTPD5O75356 428 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 SPAG7O75391 227 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 IFNA6P05013 189 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 TLX1NBP0CAT3 122 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 RAB3AP20336 220 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 RAB4AP20338 218 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 FOXA1P55317 472 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 ATP6V0D1P61421 351 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 RPS23P62266 143 aaKnown RBP3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 RPEL1Q2QD12 228 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 MRPL21Q7Z2W9 205 aaKnown RBP3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 C2orf73Q8N5S3 287 aaPredicted RBP3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 NPWQ8N729 165 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 ZNF596Q8TC21 504 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 NAT14Q8WUY8 206 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 ISOC2Q96AB3 205 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 RPEQ96AT9 228 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 EXOSC8Q96B26 276 aaKnown RBP3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 RBBP8Q99708 897 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 CHAC1Q9BUX1 264 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 USH1CQ9Y6N9 552 aa3.1□□□□□ -1.91
SSX2IP-208ENST00000490476 ZNF99A8MXY4 864 aaPredicted RBP3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 ZNF701M0R085 212 aaPredicted RBP3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 TXNDC9O14530 226 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 HPRT1P00492 218 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 RHOXF2BP0C7M4 288 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 TGFBR2P37173 567 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 TMEM33P57088 247 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 GCSAMLQ5JQS6 135 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 TIMM23BQ5SRD1 257 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 ULK3Q6PHR2 472 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 ZNF101Q8IZC7 436 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 ZNF645Q8N7E2 425 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 FAM86B1Q8N7N1 296 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 COX18Q8N8Q8 333 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 OR11H7Q8NGC8 314 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 ABHD3Q8WU67 409 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 ZNF75CPQ92670 426 aaPredicted RBP3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 RERGQ96A58 199 aaPredicted RBP3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 MRGPRFQ96AM1 343 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 GALNT14Q96FL9 552 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 RNF145Q96MT1 663 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 RILPQ96NA2 401 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 OR2A5Q96R48 311 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 PITX2Q99697 317 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 RHOXF2Q9BQY4 288 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 PARP12Q9H0J9 701 aaKnown RBP3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 STMN4Q9H169 189 aaPredicted RBP3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 TPK1Q9H3S4 243 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 DYNLRB1Q9NP97 96 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 ADA2Q9NZK5 511 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 KPTNQ9Y664 436 aa3.09□□□□□ -1.91
SSX2IP-208ENST00000490476 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.08□□□□□ -1.92
SSX2IP-208ENST00000490476 IGKV3D-11A0A0A0MRZ8 115 aa3.08□□□□□ -1.92
SSX2IP-208ENST00000490476 ZNF860A6NHJ4 632 aa3.08□□□□□ -1.92
SSX2IP-208ENST00000490476 BOLA2-SMG1P6H3BVE0 249 aa3.08□□□□□ -1.92
SSX2IP-208ENST00000490476 DFFAO00273 331 aa3.08□□□□□ -1.92
SSX2IP-208ENST00000490476 FOXH1O75593 365 aa3.08□□□□□ -1.92
SSX2IP-208ENST00000490476 LYZL6O75951 148 aa3.08□□□□□ -1.92
SSX2IP-208ENST00000490476 OTCP00480 354 aa3.08□□□□□ -1.92
SSX2IP-208ENST00000490476 OXTP01178 125 aa3.08□□□□□ -1.92
SSX2IP-208ENST00000490476 STAG3L2P0CL84 134 aa3.08□□□□□ -1.92
SSX2IP-208ENST00000490476 ZNF823P16415 610 aa3.08□□□□□ -1.92
SSX2IP-208ENST00000490476 PGAM1P18669 254 aa3.08□□□□□ -1.92
SSX2IP-208ENST00000490476 CD9P21926 228 aa3.08□□□□□ -1.92
SSX2IP-208ENST00000490476 COL8A2P25067 703 aa3.08□□□□□ -1.92
SSX2IP-208ENST00000490476 PSMB5P28074 263 aa3.08□□□□□ -1.92
SSX2IP-208ENST00000490476 SSTR5P35346 364 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms