RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 CELA3BP08861 270 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 SLC25A6P12236 298 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 MMP9P14780 707 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 ANOS1P23352 680 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 CD40P25942 277 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 DUSP1P28562 367 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 CHRNB4P30926 498 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 ZNF83P51522 516 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 LUMP51884 338 aaPredicted RBP5.38□□□□□ -1.55
SF3A3-208ENST00000489537 ARHGDIBP52566 201 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 NKX6-1P78426 367 aaPredicted RBP5.38□□□□□ -1.55
SF3A3-208ENST00000489537 GNMTQ14749 295 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 LGALSLQ3ZCW2 172 aaPredicted RBP5.38□□□□□ -1.55
SF3A3-208ENST00000489537 GPR157Q5UAW9 335 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 Q6P435 159 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 PRSS54Q6PEW0 395 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 ACP7Q6ZNF0 438 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 RNF144BQ7Z419 303 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 FAM219AQ8IW50 185 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 KCNRGQ8N5I3 272 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 FAM71E2Q8N5Q1 922 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 OR52B4Q8NGK2 314 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 MRPL30Q8TCC3 161 aaKnown RBP5.38□□□□□ -1.55
SF3A3-208ENST00000489537 Q8TCH9 128 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 CD300LFQ8TDQ1 290 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 PPP1R1CQ8WVI7 109 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 RAB39BQ96DA2 213 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 SNX22Q96L94 193 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 LURAP1Q96LR2 239 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 FANCD2OSQ96PS1 177 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 ARL6Q9H0F7 186 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 OR51B6Q9H340 312 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 PLEKHF2Q9H8W4 249 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 MBNL3Q9NUK0 354 aaKnown RBP5.38□□□□□ -1.55
SF3A3-208ENST00000489537 LIN7CQ9NUP9 197 aaKnown RBP5.38□□□□□ -1.55
SF3A3-208ENST00000489537 OR6C3Q9NZP0 311 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 LUZP4Q9P127 313 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 LPAR3Q9UBY5 353 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 ZNF230Q9UIE0 474 aaPredicted RBP5.38□□□□□ -1.55
SF3A3-208ENST00000489537 TINAGQ9UJW2 476 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 UBE2J1Q9Y385 318 aaPredicted RBP5.38□□□□□ -1.55
SF3A3-208ENST00000489537 RBM7Q9Y580 266 aaKnown RBP5.38□□□□□ -1.55
SF3A3-208ENST00000489537 SESN1Q9Y6P5 492 aa5.38□□□□□ -1.55
SF3A3-208ENST00000489537 PRRC2CQ9Y520 2896 aaKnown RBP5.38□□□□□ -1.55
SF3A3-208ENST00000489537 SPTAN1Q13813 2472 aaKnown RBP5.38□□□□□ -1.55
SF3A3-208ENST00000489537 TRAV24A0A0B4J272 114 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 A0A0G2JNJ9 132 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 C3orf85A0A1B0GTC6 90 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 A0A1W2PR80 420 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 NUDT19A8MXV4 375 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 SRRM5B3KS81 715 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 H0Y980 276 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 ITGB1BP1O14713 200 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 HS3ST1O14792 307 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 ARPC5O15511 151 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 BCL2L11O43521 198 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 TSC22D2O75157 780 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 AGFG2O95081 481 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 MPC2O95563 127 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 FSTL3O95633 263 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 SERPINE2P07093 398 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 CD55P08174 381 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 LYL1P12980 280 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 VDAC1P21796 283 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 IL2RGP31785 369 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 SERPINF1P36955 418 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 MPV17P39210 176 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 CA7P43166 264 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 HTD2P86397 168 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 IFITM2Q01629 132 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 CATR1Q13166 79 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 SLC9A3R2Q15599 337 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 HMGN3Q15651 99 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 LY6G6FQ5SQ64 297 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 LAMTOR1Q6IAA8 161 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 WDR82Q6UXN9 313 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 TMUB2Q71RG4 321 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 ZNF695Q8IW36 515 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 H1FOOQ8IZA3 346 aaPredicted RBP5.37□□□□□ -1.55
SF3A3-208ENST00000489537 ZNF561Q8N587 486 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 Q8NA96 180 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 ADAD2Q8NCV1 583 aaKnown RBP5.37□□□□□ -1.55
SF3A3-208ENST00000489537 NAXEQ8NCW5 288 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 BVESQ8NE79 360 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 ZNF680Q8NEM1 530 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 OR2Z1Q8NG97 314 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 LILRB4Q8NHJ6 448 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 SCARB1Q8WTV0 552 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 TMEM171Q8WVE6 324 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 RDH5Q92781 318 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 TOMM40LQ969M1 308 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 CCDC120Q96HB5 630 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 TMEM56Q96MV1 263 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 ARPC5LQ9BPX5 153 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 C1QTNF6Q9BXI9 259 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 KRTAP9-9Q9BYP9 154 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 KRTAP9-4Q9BYQ2 154 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 SLC5A7Q9GZV3 580 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 TMEM222Q9H0R3 208 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 SLC25A32Q9H2D1 315 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms