RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 A0A1W2PPI3 338 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 FAM90A9PA6NNJ1 464 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 C12orf77C9JDV5 145 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 SLC22A1O15245 554 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 PDCD6O75340 191 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 OR2F2O95006 317 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 AMY1AP04745 511 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 AMY2AP04746 511 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 GLAP06280 429 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 UBBP0CG47 229 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 RCC1P18754 421 aaPredicted RBP10.3□□□□□ -0.76
HDAC1-209ENST00000484305 HTR2CP28335 458 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 RPS27AP62979 156 aaKnown RBP10.3□□□□□ -0.76
HDAC1-209ENST00000484305 FABP5Q01469 135 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 UNC119Q13432 240 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 C2orf68Q2NKX9 166 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 ARSJQ5FYB0 599 aaPredicted RBP10.3□□□□□ -0.76
HDAC1-209ENST00000484305 C16orf82Q7Z2V1 217 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 DRAM1Q8N682 238 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 OR10X1Q8NGY0 326 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 WIPF2Q8TF74 440 aaPredicted RBP10.3□□□□□ -0.76
HDAC1-209ENST00000484305 CAPSLQ8WWF8 208 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 OCSTAMPQ9BR26 566 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 WNT10AQ9GZT5 417 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 GFOD1Q9NXC2 390 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 MEGF8Q7Z7M0 2845 aa10.3□□□□□ -0.76
HDAC1-209ENST00000484305 SH2D7A6NKC9 451 aaPredicted RBP10.29□□□□□ -0.76
HDAC1-209ENST00000484305 HSD17B6O14756 317 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 SPINT2O43291 252 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 CA11O75493 328 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 HBZP02008 142 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 SNRNP70P08621 437 aaKnown RBP10.29□□□□□ -0.76
HDAC1-209ENST00000484305 CSF1P09603 554 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 CD28P10747 220 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 CHATP28329 748 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 VDAC2P45880 294 aaPredicted RBP10.29□□□□□ -0.76
HDAC1-209ENST00000484305 RAB7AP51149 207 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 QRFPP83859 136 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 TRAM1Q15629 374 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 TBCEQ15813 527 aaPredicted RBP10.29□□□□□ -0.76
HDAC1-209ENST00000484305 ABCA11PQ4W5N1 156 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 NKAPLQ5M9Q1 402 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 C6orf183Q5T699 404 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 C5orf24Q7Z6I8 188 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 LYG1Q8N1E2 194 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 PRR18Q8N4B5 295 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 LINC00311Q8N616 119 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 OR56B4Q8NH76 319 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 OR1L1Q8NH94 360 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 KCNG3Q8TAE7 436 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 FAM110DQ8TAY7 271 aaPredicted RBP10.29□□□□□ -0.76
HDAC1-209ENST00000484305 AKR1E2Q96JD6 320 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 SULT4A1Q9BR01 284 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 NICN1Q9BSH3 213 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 TMEM59Q9BXS4 323 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 BLOC1S6Q9UL45 172 aa10.29□□□□□ -0.76
HDAC1-209ENST00000484305 AK6Q9Y3D8 172 aaKnown RBP10.29□□□□□ -0.76
HDAC1-209ENST00000484305 TMEM14DPA8MWL7 114 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 SLC31A2O15432 143 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 PEX14O75381 377 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 ARL6IP5O75915 188 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 BPNT1O95861 308 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 LPLP06858 475 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 FAM106CPP0CH98 169 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 PSMA1P25786 263 aaKnown RBP10.28□□□□□ -0.76
HDAC1-209ENST00000484305 REG1BP48304 166 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 ZNF134P52741 427 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 ZNF816Q0VGE8 651 aaPredicted RBP10.28□□□□□ -0.76
HDAC1-209ENST00000484305 P2RY14Q15391 338 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 SSX1Q16384 188 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 C6orf201Q7Z4U5 140 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 THNSL2Q86YJ6 484 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 C8orf31Q8N9H6 132 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 ZNF439Q8NDP4 499 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 OR6M1Q8NGM8 313 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 MRPL30Q8TCC3 161 aaKnown RBP10.28□□□□□ -0.76
HDAC1-209ENST00000484305 NEDD4LQ96PU5 975 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 FAAP24Q9BTP7 215 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 TM2D1Q9BX74 207 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 TAF9BQ9HBM6 251 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 ACOT13Q9NPJ3 140 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 MBNL3Q9NUK0 354 aaKnown RBP10.28□□□□□ -0.76
HDAC1-209ENST00000484305 GNG12Q9UBI6 72 aa10.28□□□□□ -0.76
HDAC1-209ENST00000484305 A0A0A6YYD4 124 aa10.27□□□□□ -0.77
HDAC1-209ENST00000484305 IGHV1-3A0A0C4DH29 117 aa10.27□□□□□ -0.77
HDAC1-209ENST00000484305 CCRL2O00421 344 aa10.27□□□□□ -0.77
HDAC1-209ENST00000484305 SLC17A2O00624 439 aa10.27□□□□□ -0.77
HDAC1-209ENST00000484305 FBXO24O75426 580 aa10.27□□□□□ -0.77
HDAC1-209ENST00000484305 GAPDHP04406 335 aaKnown RBP10.27□□□□□ -0.77
HDAC1-209ENST00000484305 CALRP27797 417 aaKnown RBP10.27□□□□□ -0.77
HDAC1-209ENST00000484305 EMX1Q04741 257 aaPredicted RBP10.27□□□□□ -0.77
HDAC1-209ENST00000484305 HES1Q14469 280 aa10.27□□□□□ -0.77
HDAC1-209ENST00000484305 HNF4GQ14541 408 aa10.27□□□□□ -0.77
HDAC1-209ENST00000484305 TRAT1Q6PIZ9 186 aa10.27□□□□□ -0.77
HDAC1-209ENST00000484305 SLC25A48Q6ZT89 311 aaKnown RBP10.27□□□□□ -0.77
HDAC1-209ENST00000484305 ZNF367Q7RTV3 350 aa10.27□□□□□ -0.77
HDAC1-209ENST00000484305 OR8H3Q8N146 312 aa10.27□□□□□ -0.77
HDAC1-209ENST00000484305 OR10V1Q8NGI7 309 aa10.27□□□□□ -0.77
HDAC1-209ENST00000484305 ST6GALNAC6Q969X2 333 aa10.27□□□□□ -0.77
HDAC1-209ENST00000484305 PLGRKTQ9HBL7 147 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms