RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 VDAC3Q9Y277 283 aa9.97□□□□□ -0.81
SEC61A1-205ENST00000483956 IGHV2OR16-5A0A0B4J2B6 119 aa9.96□□□□□ -0.81
SEC61A1-205ENST00000483956 GRIFINA4D1Z8 144 aa9.96□□□□□ -0.81
SEC61A1-205ENST00000483956 ZNF732B4DXR9 585 aa9.96□□□□□ -0.81
SEC61A1-205ENST00000483956 TRAF3IP2O43734 574 aaPredicted RBP9.96□□□□□ -0.81
SEC61A1-205ENST00000483956 COMPP49747 757 aaPredicted RBP9.96□□□□□ -0.81
SEC61A1-205ENST00000483956 MYBPHQ13203 477 aa9.96□□□□□ -0.81
SEC61A1-205ENST00000483956 KIAA2026Q5HYC2 2103 aa9.96□□□□□ -0.81
SEC61A1-205ENST00000483956 Q6ZN92 141 aa9.96□□□□□ -0.81
SEC61A1-205ENST00000483956 ERASQ7Z444 233 aa9.96□□□□□ -0.81
SEC61A1-205ENST00000483956 LMX1AQ8TE12 382 aa9.96□□□□□ -0.81
SEC61A1-205ENST00000483956 TXN2Q99757 166 aa9.96□□□□□ -0.81
SEC61A1-205ENST00000483956 SLC45A2Q9UMX9 530 aa9.96□□□□□ -0.81
SEC61A1-205ENST00000483956 B3GALT1Q9Y5Z6 326 aa9.96□□□□□ -0.81
SEC61A1-205ENST00000483956 FER1L5A0AVI2 2057 aa9.96□□□□□ -0.81
SEC61A1-205ENST00000483956 CCDC163A0A0D9SF12 145 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 C2orf72A6NCS6 295 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 H3BML4 177 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 EFNA2O43921 213 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 CDS2O95674 445 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 DYNLT3P51808 116 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 UBE2NP61088 152 aaKnown RBP9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 RPL23P62829 140 aaKnown RBP9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 MFAP5Q13361 173 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 HIST3H3Q16695 136 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 ZNF787Q6DD87 383 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 FAM57BQ71RH2 274 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 C1QL2Q7Z5L3 287 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 MAGT1Q9H0U3 335 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 ZNF703Q9H7S9 590 aaPredicted RBP9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 ZNF160Q9HCG1 818 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 ZNF701Q9NV72 531 aaPredicted RBP9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 A0A1B0GX78 115 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 SLC33A1O00400 549 aaPredicted RBP9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 RER1O15258 196 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 OPN1LWP04000 364 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 CDAP32320 146 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 HNRNPA3P51991 378 aaKnown RBP9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 CLDN17P56750 224 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 OR5T1Q8NG75 326 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 DYRK2Q92630 601 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 GNPNAT1Q96EK6 184 aaPredicted RBP9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 OR51I2Q9H344 312 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 HSPB7Q9UBY9 170 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 WIPI2Q9Y4P8 454 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 TRAPPC1Q9Y5R8 145 aa9.96□□□□□ -0.82
SEC61A1-205ENST00000483956 MRPS34P82930 218 aaKnown RBP9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 TMEM41BQ5BJD5 291 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 OR2D3Q8NGH3 330 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 RPUSD4Q96CM3 377 aaKnown RBP9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 PATZ1Q9HBE1 687 aaKnown RBP9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 CD207Q9UJ71 328 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 IGLV3-32A0A0A0MS00 114 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 PROB1E7EW31 1015 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 J3QW42 95 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 TYMSP04818 313 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 ARL4DP49703 201 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 ZNF133P52736 654 aaPredicted RBP9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 PLPPR5Q32ZL2 321 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 SPATA45Q537H7 98 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 DMRTC1Q5HYR2 192 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 Q5PR19 223 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 OGFOD3Q6PK18 319 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 C16orf47Q6ZP98 133 aaPredicted RBP9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 Q6ZSR3 168 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 CYP2G1PQ6ZSU1 146 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 CENPVQ7Z7K6 275 aaPredicted RBP9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 S100A7AQ86SG5 101 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 MCEMP1Q8IX19 187 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 D2HGDHQ8N465 521 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 PP6455Q8WZ26 134 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 LIME1Q9H400 295 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 NAA60Q9H7X0 242 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 MCTS1Q9ULC4 181 aaKnown RBP9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 ST3GAL6Q9Y274 331 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 BRWD1Q9NSI6 2320 aa9.95□□□□□ -0.82
SEC61A1-205ENST00000483956 TRAV1-1A0A0B4J248 108 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 EPOPA6NHQ4 379 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 HYPMO75409 117 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 DTYMKP23919 212 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 IL3RAP26951 378 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 TPPP2P59282 170 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 RPL15P61313 204 aaKnown RBP9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 MRPL49Q13405 166 aaKnown RBP9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 PHLDA2Q53GA4 152 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 TMEM252Q8N6L7 170 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 LRTM2Q8N967 370 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 OR5D18Q8NGL1 313 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 OR5L1Q8NGL2 311 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 RTN4IP1Q8WWV3 396 aaPredicted RBP9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 C18orf12Q96KH6 178 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 LYZL4Q96KX0 146 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 CLEC1BQ9P126 229 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 IL19Q9UHD0 177 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 RNF114Q9Y508 228 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 SHISA8B8ZZ34 492 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 SSSCA1O60232 199 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 SYNGR4O95473 234 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 HLA-HP01893 362 aa9.94□□□□□ -0.82
SEC61A1-205ENST00000483956 BMI1P35226 326 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms