RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 C20orf196Q8IYI0 205 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 TMEM171Q8WVE6 324 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 ELOVL1Q9BW60 279 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 ZNF701Q9NV72 531 aaPredicted RBP11.17□□□□□ -0.62
CCNL1-216ENST00000475298 LAMP3Q9UQV4 416 aa11.17□□□□□ -0.62
CCNL1-216ENST00000475298 A0A1W2PPQ1 181 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 SPRY1O43609 319 aaPredicted RBP11.16□□□□□ -0.62
CCNL1-216ENST00000475298 CXCL13O43927 109 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 CEACAM1P13688 526 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 OR10J1P30954 320 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 TDRG1Q3Y452 100 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 CDCP2Q5VXM1 449 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 ETFRF1Q6IPR1 90 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 NUFIP2Q7Z417 695 aaKnown RBP11.16□□□□□ -0.62
CCNL1-216ENST00000475298 PPP1R32Q7Z5V6 425 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 GGNQ86UU5 652 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 C11orf42Q8N5U0 333 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 RBMXL1Q96E39 390 aaKnown RBP11.16□□□□□ -0.62
CCNL1-216ENST00000475298 MIEN1Q9BRT3 115 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 CTDSP1Q9GZU7 261 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 HIPK2Q9H2X6 1198 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 MCTS1Q9ULC4 181 aaKnown RBP11.16□□□□□ -0.62
CCNL1-216ENST00000475298 PCSK5Q92824 1860 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 AHCTF1Q8WYP5 2266 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 CTSDP07339 412 aaPredicted RBP11.16□□□□□ -0.62
CCNL1-216ENST00000475298 TMEM187Q14656 261 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 WIPI1Q5MNZ9 446 aaPredicted RBP11.16□□□□□ -0.62
CCNL1-216ENST00000475298 ZNF100Q8IYN0 542 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 TMEM37Q8WXS4 190 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 C11orf1Q9H5F2 150 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 MSL2Q9HCI7 577 aa11.16□□□□□ -0.62
CCNL1-216ENST00000475298 AURKAIP1Q9NWT8 199 aaPredicted RBP11.16□□□□□ -0.62
CCNL1-216ENST00000475298 FAM24AA6NFZ4 105 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 MSTNO14793 375 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 ZNHIT1O43257 154 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 TRAPPC6AO75865 159 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 CER1O95813 267 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 P04436 131 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 JMJD7P0C870 316 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 TMEM225BP0DP42 221 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 DUSP3P51452 185 aaPredicted RBP11.15□□□□□ -0.62
CCNL1-216ENST00000475298 ERVS71-1P61550 626 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 BATFQ16520 125 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 FAM27BQ5VT28 67 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 TGIF2LYQ8IUE0 185 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 DEFB123Q8N688 67 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 FGFBP3Q8TAT2 258 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 PP6455Q8WZ26 134 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 SPTSSAQ969W0 71 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 TBX15Q96SF7 602 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 C20orf144Q9BQM9 153 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 DEPPQ9NTK1 212 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 DOCK10Q96BY6 2186 aa11.15□□□□□ -0.62
CCNL1-216ENST00000475298 IGKV1-27A0A075B6S5 117 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 IGSF23A1L1A6 192 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 PINLYPA6NC86 204 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 LRRC3CA6NJW4 275 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 CCL25O15444 150 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 ST8SIA3O43173 380 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 ZNF205O95201 554 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 TCN2P20062 427 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 CRYGSP22914 178 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 CEACAM8P31997 349 aaPredicted RBP11.14□□□□□ -0.63
CCNL1-216ENST00000475298 MTCP1P56278 107 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 CARD18P57730 90 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 RAC3P60763 192 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 VAMP2P63027 116 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 MRPS34P82930 218 aaKnown RBP11.14□□□□□ -0.63
CCNL1-216ENST00000475298 ZNF266Q14584 549 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 ACTL10Q5JWF8 245 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 TIPARPQ7Z3E1 657 aaKnown RBP11.14□□□□□ -0.63
CCNL1-216ENST00000475298 TMEM105Q8N8V8 129 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 GUCD1Q96NT3 240 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 ZNF2Q9BSG1 426 aaPredicted RBP11.14□□□□□ -0.63
CCNL1-216ENST00000475298 LIME1Q9H400 295 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 GPR35Q9HC97 309 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 FOXJ2Q9P0K8 574 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 GPR179Q6PRD1 2367 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 ZNF716A6NP11 495 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 SYNGR3O43761 229 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 ZNF32P17041 273 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 RAB7AP51149 207 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 CLDN15P56746 228 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 SELENOTP62341 195 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 RUNX1Q01196 453 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 PEAR1Q5VY43 1037 aaPredicted RBP11.14□□□□□ -0.63
CCNL1-216ENST00000475298 FBXW12Q6X9E4 464 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 C16orf82Q7Z2V1 217 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 NECAP1Q8NC96 275 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 OR51G1Q8NGK1 321 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 ZNF845Q96IR2 970 aaPredicted RBP11.14□□□□□ -0.63
CCNL1-216ENST00000475298 C18orf12Q96KH6 178 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 DECR2Q9NUI1 292 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 GNG13Q9P2W3 67 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 SLC7A11Q9UPY5 501 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 FUT9Q9Y231 359 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 NCOR1O75376 2440 aa11.14□□□□□ -0.63
CCNL1-216ENST00000475298 FRYQ5TBA9 3013 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 ZNF732B4DXR9 585 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 YPEL1O60688 119 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms