RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 LYPD6Q86Y78 171 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 GID4Q8IVV7 300 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 LINC00311Q8N616 119 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 TCEANCQ8N8B7 351 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 C8orf31Q8N9H6 132 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 OR51A4Q8NGJ6 313 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 OR52M1Q8NGK5 317 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 OR13C9Q8NGT0 318 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 OR2G2Q8NGZ5 317 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 OR10AC1Q8NH08 325 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 CNIH3Q8TBE1 160 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 PLPPR1Q8TBJ4 325 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 TMEM163Q8TC26 289 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 CANT1Q8WVQ1 401 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 DNAJC9Q8WXX5 260 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 ARPC1AQ92747 370 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 CCDC124Q96CT7 223 aaKnown RBP3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 ASB9Q96DX5 294 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 IL4I1Q96RQ9 567 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 SPATA25Q9BR10 227 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 CHCHD6Q9BRQ6 235 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 PRRG3Q9BZD7 231 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 BARHL1Q9BZE3 327 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 FAM107BQ9H098 131 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 OR51J1Q9H342 316 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 NEK6Q9HC98 313 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 ZNF446Q9NWS9 450 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 CHCHD3Q9NX63 227 aaKnown RBP3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 ZNF107Q9UII5 783 aaPredicted RBP3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 MYRFQ9Y2G1 1151 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 WSB1Q9Y6I7 421 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 PKD1P98161 4303 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 HSPG2P98160 4391 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 IGHV4OR15-8A0A075B7B6 117 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 A0A087WW49 117 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 ZAR1LA6NP61 321 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 LINC01619G3V211 115 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 C15orf65H3BRN8 121 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 SDCBPO00560 298 aaPredicted RBP3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 ATP6V0E1O15342 81 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 SLC31A2O15432 143 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 TXNL1O43396 289 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 HLA-DRB1P01911 266 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 LGALS1P09382 135 aaKnown RBP3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 OR8U9P0C7N5 309 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 OCM2P0CE71 109 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 OCMP0CE72 109 aaPredicted RBP3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 TMEM225BP0DP42 221 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 DBTP11182 482 aaKnown RBP3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 IL3RAP26951 378 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 VHLP40337 213 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 KCNJ3P48549 501 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 RAB9AP51151 201 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 DAPP51397 102 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 NANOS3P60323 173 aaKnown RBP3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 NDPQ00604 133 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 GALEQ14376 348 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 IL13RA2Q14627 380 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 KISS1Q15726 138 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 HAGHQ16775 308 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 PIGYQ3MUY2 71 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 TP53I3Q53FA7 332 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 ANKRD39Q53RE8 183 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 C19orf54Q5BKX5 351 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 C12orf73Q69YU5 71 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 ELP2Q6IA86 826 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 FAM220AQ7Z4H9 259 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 HAPLN4Q86UW8 402 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 MINDY2Q8NBR6 621 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 ZNF439Q8NDP4 499 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 BVESQ8NE79 360 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 OR10H4Q8NGA5 316 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 UBALD1Q8TB05 177 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 LRGUKQ96M69 825 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 NR1H4Q96RI1 486 aaPredicted RBP3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 TOLLIPQ9H0E2 274 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 GHITMQ9H3K2 345 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 ZCCHC4Q9H5U6 513 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 IFT22Q9H7X7 185 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 PARP11Q9NR21 331 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 GFOD1Q9NXC2 390 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 H2AFY2Q9P0M6 372 aaPredicted RBP3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 ZNF581Q9P0T4 197 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 KIAA1456Q9P272 454 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 WARS2Q9UGM6 360 aaKnown RBP3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 GNG8Q9UK08 70 aa3.94□□□□□ -1.78
SNRNP40-204ENST00000474025 IGHV7-81A0A0B4J1V7 117 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 IGHV3-43A0A0B4J1X8 118 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 TRAV41A0A0B4J266 112 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 TMEM30CPA0ZSE6 113 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 AQP12BA6NM10 295 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 SOX15O60248 233 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 MITFO75030 526 aaPredicted RBP3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 DCTN3O75935 186 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 IGLV1-51P01701 117 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 IFNA6P05013 189 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 IGHV3-43DP0DP04 118 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 HOXB6P17509 224 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 GZMHP20718 246 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 CNTFRP26992 372 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms