RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 NPIPB11E5RHQ5 1161 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 GABARAPH6UMI1 98 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 SULT1C2O00338 296 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 SDCBPO00560 298 aaPredicted RBP8.34□□□□□ -1.07
UPF2-204ENST00000460569 MMP23AO75900 390 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 HBZP02008 142 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 CGB3P0DN86 165 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 CGB7P0DN87 165 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 IGHV1-8P0DP01 117 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 IGHV3-43DP0DP04 118 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 MMP9P14780 707 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 COX7A1P24310 79 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 NFYBP25208 207 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 GDNFP39905 211 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 ETV6P41212 452 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 DLX1P56177 255 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 MRPS10P82664 201 aaKnown RBP8.34□□□□□ -1.07
UPF2-204ENST00000460569 DGCR2P98153 550 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 KLRD1Q13241 179 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 PYDC2Q56P42 97 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 HEPN1Q6WQI6 88 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 C1orf122Q6ZSJ8 110 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 C11orf42Q8N5U0 333 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 BEST4Q8NFU0 473 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 OR52I2Q8NH67 350 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 FCAMRQ8WWV6 532 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 KIRREL1Q96J84 757 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 TBX15Q96SF7 602 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 SOSTQ9BQB4 213 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 OCSTAMPQ9BR26 566 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 SUCNR1Q9BXA5 334 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 SESN1Q9Y6P5 492 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 HIVEP1P15822 2718 aa8.34□□□□□ -1.07
UPF2-204ENST00000460569 CELSR1Q9NYQ6 3014 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 IGKV1D-8A0A087WSZ0 117 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 TRAV40A0A0B4J280 105 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 F2RL2O00254 374 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 CTDSPLO15194 276 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 FABP7O15540 132 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 SCTP09683 121 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 GSTT2P0CG29 244 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 GSTT2BP0CG30 244 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 HOXB4P17483 251 aaPredicted RBP8.33□□□□□ -1.08
UPF2-204ENST00000460569 PRTN3P24158 256 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 FPR2P25090 351 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 PTBP1P26599 531 aaKnown RBP eCLIP8.33□□□□□ -1.08
UPF2-204ENST00000460569 RCVRNP35243 200 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 ARPC4P59998 168 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 ACTBP60709 375 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 ACTG1P63261 375 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 ZNF79Q15937 498 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 SRSF7Q16629 238 aaKnown RBP eCLIP8.33□□□□□ -1.08
UPF2-204ENST00000460569 TMEM30BQ3MIR4 351 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 NCR3LG1Q68D85 454 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 OR52W1Q6IF63 320 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 Q6ZS49 121 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 LINC00299Q6ZSB3 139 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 HOGA1Q86XE5 327 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 PDZD9Q8IXQ8 264 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 OR10V1Q8NGI7 309 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 OR4A4PQ8NGN8 299 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 SMIM4Q8WVI0 70 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 SNAPC3Q92966 411 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 LHX4Q969G2 390 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 UPRTQ96BW1 309 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 GALMQ96C23 342 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 TMEM133Q9H2Q1 129 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 LINC00574Q9H8X3 128 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 GNG12Q9UBI6 72 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 ANXA10Q9UJ72 324 aa8.33□□□□□ -1.08
UPF2-204ENST00000460569 IGHV3OR16-10A0A075B7F0 116 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 BET1O15155 118 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 HSPA12AO43301 675 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 RBBP9O75884 186 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 AVPP01185 164 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 IGHV3-7P01780 117 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 GNG10P50151 68 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 HTD2P86397 168 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 ZNF45Q02386 682 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 GNMTQ14749 295 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 HERPUD1Q15011 391 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 CHRFAM7AQ494W8 412 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 IL17RELQ6ZVW7 336 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 Q71RC1 249 aaPredicted RBP8.32□□□□□ -1.08
UPF2-204ENST00000460569 Q8N402 240 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 MFSD4AQ8N468 514 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 PNKDQ8N490 385 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 OR10A7Q8NGE5 316 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 OR52L2PQ8NGH6 319 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 OR52M1Q8NGK5 317 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 OR13D1Q8NGV5 346 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 S100ZQ8WXG8 99 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 LEAP2Q969E1 77 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 GINS4Q9BRT9 223 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 CABLES2Q9BTV7 478 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 SRRQ9GZT4 340 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 GSX1Q9H4S2 264 aaPredicted RBP8.32□□□□□ -1.08
UPF2-204ENST00000460569 HEXA-AS1Q9H8Q6 139 aa8.32□□□□□ -1.08
UPF2-204ENST00000460569 UNKLQ9H9P5 680 aaKnown RBP8.32□□□□□ -1.08
UPF2-204ENST00000460569 AKIP1Q9NQ31 210 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms