RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 SHHQ15465 462 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 LRRC75BQ2VPJ9 315 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 GPR137CQ8N3F9 429 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 SNHG12Q9BXW3 62 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 FER1L5A0AVI2 2057 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 ZNF816-ZNF321PA0A0X1KG74 233 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 TP53I11O14683 189 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 CST2P09228 141 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 OR4A8P0C604 315 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 FGF5P12034 268 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 PSMB3P49720 205 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 RPL23P62829 140 aaKnown RBP11.75□□□□□ -0.53
PTPRE-204ENST00000455661 ACTL10Q5JWF8 245 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 PRAMEF20Q5VT98 475 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 RABEPKQ7Z6M1 372 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 CENPVQ7Z7K6 275 aaPredicted RBP11.75□□□□□ -0.53
PTPRE-204ENST00000455661 BATF2Q8N1L9 274 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 ZNF525Q8N782 197 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 NEK7Q8TDX7 302 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 RPUSD4Q96CM3 377 aaKnown RBP11.75□□□□□ -0.53
PTPRE-204ENST00000455661 ZNF837Q96EG3 531 aaPredicted RBP11.75□□□□□ -0.53
PTPRE-204ENST00000455661 ZNF845Q96IR2 970 aaPredicted RBP11.75□□□□□ -0.53
PTPRE-204ENST00000455661 UCN2Q96RP3 112 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 FUT9Q9Y231 359 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 GON4LQ3T8J9 2241 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 hCG_38984A0A1B0GV85 526 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 SYNGR2O43760 224 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 SCGB1D1O95968 90 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 COX5BP10606 129 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 OR2T10Q8NGZ9 312 aa11.75□□□□□ -0.53
PTPRE-204ENST00000455661 A0A0G2JRQ6 117 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 A0A1W2PR77 199 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 CD300LBA8K4G0 201 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 B4E171 279 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 TMEM250H0YL14 139 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 MMP7P09237 267 aaPredicted RBP11.74□□□□□ -0.53
PTPRE-204ENST00000455661 CD27P26842 260 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 TSPAN7P41732 249 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 ELLP55199 621 aaPredicted RBP11.74□□□□□ -0.53
PTPRE-204ENST00000455661 HYAL1Q12794 435 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 CALHM1Q8IU99 346 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 C7orf61Q8IZ16 206 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 CISD2Q8N5K1 135 aaKnown RBP11.74□□□□□ -0.53
PTPRE-204ENST00000455661 RASL10BQ96S79 203 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 TMEM106CQ9BVX2 250 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 DEFB126Q9BYW3 111 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 SEMA5BQ9P283 1151 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 LRRC3CA6NJW4 275 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 NAPSAO96009 420 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 IAPPP10997 89 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 ZNF32P17041 273 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 SRP14P37108 136 aaKnown RBP11.74□□□□□ -0.53
PTPRE-204ENST00000455661 ZNF92Q03936 586 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 RELQ04864 619 aaPredicted RBP11.74□□□□□ -0.53
PTPRE-204ENST00000455661 HERPUD1Q15011 391 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 CLEC12BQ2HXU8 276 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 RAET1LQ5VY80 246 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 KCNIP4Q6PIL6 250 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 ZNF295-AS1Q8N0V1 137 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 PARD6GQ9BYG4 376 aaPredicted RBP11.74□□□□□ -0.53
PTPRE-204ENST00000455661 WDR61Q9GZS3 305 aaKnown RBP11.74□□□□□ -0.53
PTPRE-204ENST00000455661 FKBP11Q9NYL4 201 aa11.74□□□□□ -0.53
PTPRE-204ENST00000455661 OR6C6A6NF89 314 aa11.73□□□□□ -0.53
PTPRE-204ENST00000455661 KIAA1324LA8MWY0 1029 aaPredicted RBP11.73□□□□□ -0.53
PTPRE-204ENST00000455661 ZNF25P17030 456 aaPredicted RBP11.73□□□□□ -0.53
PTPRE-204ENST00000455661 HOXA6P31267 233 aa11.73□□□□□ -0.53
PTPRE-204ENST00000455661 C1orf194Q5T5A4 169 aa11.73□□□□□ -0.53
PTPRE-204ENST00000455661 OR51H1Q8NH63 302 aa11.73□□□□□ -0.53
PTPRE-204ENST00000455661 MRPL30Q8TCC3 161 aaKnown RBP11.73□□□□□ -0.53
PTPRE-204ENST00000455661 CBLN4Q9NTU7 201 aa11.73□□□□□ -0.53
PTPRE-204ENST00000455661 OR6C3Q9NZP0 311 aa11.73□□□□□ -0.53
PTPRE-204ENST00000455661 ATP23Q9Y6H3 246 aa11.73□□□□□ -0.53
PTPRE-204ENST00000455661 M0QZK8 103 aa11.72□□□□□ -0.53
PTPRE-204ENST00000455661 GGCTO75223 188 aaKnown RBP11.72□□□□□ -0.53
PTPRE-204ENST00000455661 PSG2P11465 335 aa11.72□□□□□ -0.53
PTPRE-204ENST00000455661 CNN1P51911 297 aaKnown RBP11.72□□□□□ -0.53
PTPRE-204ENST00000455661 ARL16Q0P5N6 197 aa11.72□□□□□ -0.53
PTPRE-204ENST00000455661 TEX38Q6PEX7 206 aa11.72□□□□□ -0.53
PTPRE-204ENST00000455661 GBGT1Q8N5D6 347 aa11.72□□□□□ -0.53
PTPRE-204ENST00000455661 ZIC4Q8N9L1 334 aa11.72□□□□□ -0.53
PTPRE-204ENST00000455661 R3HDM4Q96D70 268 aa11.72□□□□□ -0.53
PTPRE-204ENST00000455661 ELOVL1Q9BW60 279 aa11.72□□□□□ -0.53
PTPRE-204ENST00000455661 PARLQ9H300 379 aa11.72□□□□□ -0.53
PTPRE-204ENST00000455661 CACNG5Q9UF02 275 aa11.72□□□□□ -0.53
PTPRE-204ENST00000455661 TYMSP04818 313 aa11.72□□□□□ -0.53
PTPRE-204ENST00000455661 SFTPCP11686 197 aa11.72□□□□□ -0.53
PTPRE-204ENST00000455661 BCL3P20749 454 aa11.72□□□□□ -0.53
PTPRE-204ENST00000455661 TDGF1P3P51864 188 aa11.72□□□□□ -0.53
PTPRE-204ENST00000455661 LBX1P52954 281 aa11.72□□□□□ -0.53
PTPRE-204ENST00000455661 DAZAP2Q15038 168 aaPredicted RBP11.72□□□□□ -0.53
PTPRE-204ENST00000455661 TESK1Q15569 626 aa11.72□□□□□ -0.53
PTPRE-204ENST00000455661 Q6ZS52 159 aa11.72□□□□□ -0.53
PTPRE-204ENST00000455661 Q8NFD4 153 aa11.72□□□□□ -0.53
PTPRE-204ENST00000455661 LSM10Q969L4 123 aaKnown RBP11.72□□□□□ -0.53
PTPRE-204ENST00000455661 TMEM38BQ9NVV0 291 aa11.72□□□□□ -0.53
PTPRE-204ENST00000455661 C19orf25Q9UFG5 118 aaPredicted RBP11.72□□□□□ -0.53
PTPRE-204ENST00000455661 CHCHD2Q9Y6H1 151 aaPredicted RBP11.72□□□□□ -0.53
PTPRE-204ENST00000455661 PATE4P0C8F1 98 aa11.71□□□□□ -0.53
PTPRE-204ENST00000455661 OR10J1P30954 320 aa11.71□□□□□ -0.53
PTPRE-204ENST00000455661 RTP5Q14D33 572 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms