RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 RBFOX3A6NFN3 312 aa10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 M0R296 226 aa10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 SLC33A1O00400 549 aaPredicted RBP10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 C1QL1O75973 258 aa10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 HSPB1P04792 205 aaKnown RBP10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 CA6P23280 308 aa10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 PMS2P11Q13670 270 aa10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 HABP2Q14520 560 aaPredicted RBP10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 TESK1Q15569 626 aa10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 ZNF766Q5HY98 468 aa10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 OR2T2Q6IF00 324 aa10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 INO80CQ6PI98 192 aaPredicted RBP10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 C5orf24Q7Z6I8 188 aa10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 WDR86Q86TI4 376 aa10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 BATF2Q8N1L9 274 aa10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 ZNF561Q8N587 486 aa10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 ZBTB34Q8NCN2 500 aa10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 RDH5Q92781 318 aa10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 YPEL4Q96NS1 127 aa10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 CLCC1Q96S66 551 aa10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 PSMG3Q9BT73 122 aaPredicted RBP10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 PARP12Q9H0J9 701 aaKnown RBP10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 ESRP2Q9H6T0 727 aaKnown RBP10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 RPS10P5Q9NQ39 176 aa10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 LIN7CQ9NUP9 197 aaKnown RBP10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 ERRFI1Q9UJM3 462 aaPredicted RBP10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 RNF150Q9ULK6 438 aa10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 MMP24Q9Y5R2 645 aa10.61□□□□□ -0.71
ECHDC1-209ENST00000454591 A0A087WWC5 75 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 A0A0G2JRQ6 117 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 ZNF98A6NK75 572 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 C1orf196B1AJZ1 125 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 WRBO00258 174 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 PPIHO43447 177 aaKnown RBP10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 NDUFS6O75380 124 aaKnown RBP10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 RHBDL1O75783 438 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 IGKV1-39P01597 117 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 IGKV1D-39P04432 117 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 SERPINE2P07093 398 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 ZNF44P15621 663 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 PPP1CBP62140 327 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 TGFBR3Q03167 851 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 TLE4Q04727 773 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 C3AR1Q16581 482 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 STX12Q86Y82 276 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 C1QL4Q86Z23 238 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 SUMF1Q8NBK3 374 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 SCCPDHQ8NBX0 429 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 ZNF488Q96MN9 340 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 ESPL1Q14674 2120 aa10.6□□□□□ -0.71
ECHDC1-209ENST00000454591 RNF212BA8MTL3 300 aa10.59□□□□□ -0.71
ECHDC1-209ENST00000454591 HS3ST1O14792 307 aa10.59□□□□□ -0.71
ECHDC1-209ENST00000454591 SH2D1BO14796 132 aa10.59□□□□□ -0.71
ECHDC1-209ENST00000454591 TNFSF15O95150 251 aa10.59□□□□□ -0.71
ECHDC1-209ENST00000454591 OR2H2O95918 312 aa10.59□□□□□ -0.71
ECHDC1-209ENST00000454591 SRP19P09132 144 aaKnown RBP10.59□□□□□ -0.71
ECHDC1-209ENST00000454591 PAX5Q02548 391 aa10.59□□□□□ -0.71
ECHDC1-209ENST00000454591 RNFT1Q5M7Z0 435 aa10.59□□□□□ -0.71
ECHDC1-209ENST00000454591 C17orf78Q8N4C9 275 aa10.59□□□□□ -0.71
ECHDC1-209ENST00000454591 C1orf162Q8NEQ5 155 aaPredicted RBP10.59□□□□□ -0.71
ECHDC1-209ENST00000454591 PRR7Q8TB68 274 aa10.59□□□□□ -0.71
ECHDC1-209ENST00000454591 SFT2D1Q8WV19 159 aa10.59□□□□□ -0.71
ECHDC1-209ENST00000454591 C14orf79Q96F83 325 aa10.59□□□□□ -0.71
ECHDC1-209ENST00000454591 MAGT1Q9H0U3 335 aa10.59□□□□□ -0.71
ECHDC1-209ENST00000454591 MED13Q9UHV7 2174 aa10.59□□□□□ -0.71
ECHDC1-209ENST00000454591 USP34Q70CQ2 3546 aa10.59□□□□□ -0.71
ECHDC1-209ENST00000454591 A0A1B0GWJ7 208 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 A0A1W2PR80 420 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 C5orf52A6NGY3 159 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 ZNF891A8MT65 544 aaPredicted RBP10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 SYNGR2O43760 224 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 ZNF806P0C7X5 589 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 PSG2P11465 335 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 EPHA1P21709 976 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 RAB2AP61019 212 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 EIF4EBP1Q13541 118 aaPredicted RBP10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 TGIF1Q15583 401 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 ZNF585BQ52M93 769 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 KHDC3LQ587J8 217 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 SOHLH1Q5JUK2 328 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 AKR1C8PQ5T2L2 129 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 HES3Q5TGS1 186 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 IGFL2Q6UWQ7 119 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 TCTEX1D1Q8N7M0 179 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 MBD3L1Q8WWY6 194 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 C12orf49Q9H741 205 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 SEBOXQ9HB31 216 aaPredicted RBP10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 CDH20Q9HBT6 801 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 FBXO7Q9Y3I1 522 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 CNTRLQ7Z7A1 2325 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 ZNF407Q9C0G0 2248 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 UBE2CO00762 179 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 HSPB6O14558 160 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 CST7O76096 145 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 SCAF4O95104 1147 aaKnown RBP10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 IFNA5P01569 189 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 IGKV1-5P01602 117 aa10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 SNRNP70P08621 437 aaKnown RBP10.58□□□□□ -0.72
ECHDC1-209ENST00000454591 P0C879 139 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms