RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 AZIN1O14977 448 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 EIF3HO15372 352 aaKnown RBP eCLIP3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 SLC16A7O60669 478 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 KHDRBS3O75525 346 aaKnown RBP3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 RENP00797 406 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 TPM3P06753 285 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 GSTA1P08263 222 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 FGF4P08620 206 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 GIG44P09565 113 aaPredicted RBP3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 GABRB1P18505 474 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 TAC1P20366 129 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 ERP29P30040 261 aaKnown RBP3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 GPM6AP51674 278 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 TPPP2P59282 170 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 ABCE1P61221 599 aaKnown RBP3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 PRDX4Q13162 271 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 DUSP7Q16829 419 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 LRRC36Q1X8D7 754 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 C17orf58Q2M2W7 97 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 AKIRIN2Q53H80 203 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 MESTQ5EB52 335 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 ANXA8L1Q5VT79 327 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 SPSB3Q6PJ21 355 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 DRAM2Q6UX65 266 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 FAM122BQ7Z309 247 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 MOB3BQ86TA1 216 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 TCTEX1D1Q8N7M0 179 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 ASCC1Q8N9N2 400 aaKnown RBP3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 PFN4Q8NHR9 129 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 MAL2Q969L2 176 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 PPP3R2Q96LZ3 170 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 PAPOLGQ9BWT3 736 aaKnown RBP3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 TAS2R3Q9NYW6 316 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 MLXQ9UH92 298 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 ZNF221Q9UK13 617 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 SLC7A11Q9UPY5 501 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 PSG11Q9UQ72 335 aa3.59□□□□□ -1.83
SBDSP1-204ENST00000453858 TRAPPC13A5PLN9 417 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 ZNF732B4DXR9 585 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 FAM90A26D6RGX4 464 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 F8VVB4 439 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 F8VWA3 439 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 KDM4BO94953 1096 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 IGHV3-7P01780 117 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 SLC2A1P11166 492 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 ANXA7P20073 488 aaKnown RBP3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 CBLN1P23435 193 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 RGS8P57771 180 aaPredicted RBP3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 DSTNP60981 165 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 GNG3P63215 75 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 EDDM3AQ14507 147 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 CDK5R1Q15078 307 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 TMEM30BQ3MIR4 351 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 SPANXN4Q5MJ08 99 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 PAPPA-AS1Q5QFB9 102 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 LRIF1Q5T3J3 769 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 Q6ZSA8 131 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 ZNF621Q6ZSS3 439 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 RBM45Q8IUH3 476 aaKnown RBP3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 LINC00346Q8IVM7 164 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 OR4D11Q8NGI4 311 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 OR6T1Q8NGN1 323 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 OR13A1Q8NGR1 328 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 OR52J3Q8NH60 311 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 HAVCR2Q8TDQ0 301 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 DYNLRB2Q8TF09 96 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 LEAP2Q969E1 77 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 TESCQ96BS2 214 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 SAT2Q96F10 170 aaPredicted RBP3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 GRAMD2BQ96HH9 432 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 Q96M85 177 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 CNN2Q99439 309 aaKnown RBP3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 MCHR1Q99705 422 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 NICN1Q9BSH3 213 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 C1QTNF4Q9BXJ3 329 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 ANKRD60Q9BZ19 345 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 LINC00574Q9H8X3 128 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 UBQLN2Q9UHD9 624 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 ENPP5Q9UJA9 477 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 SLC7A7Q9UM01 511 aa3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 AMMECR1Q9Y4X0 333 aaPredicted RBP3.58□□□□□ -1.84
SBDSP1-204ENST00000453858 SAA2-SAA4A0A096LPE2 208 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 C15orf62A8K5M9 175 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 ZNF705EA8MWA4 302 aaPredicted RBP3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 HSD17B6O14756 317 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 XRCC2O43543 280 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 TRGV3P03979 118 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 GAPDHP04406 335 aaKnown RBP3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 OR1E2P47887 323 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 REG1BP48304 166 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 PPP5CP53041 499 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 CRYBA2P53672 197 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 DNAJB13P59910 316 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 TPM4P67936 248 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 EMX2Q04743 252 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 GAGE2BQ13066 116 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 ECSCRQ19T08 205 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 IZUMO4Q1ZYL8 232 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 RPEL1Q2QD12 228 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 CEACAM21Q3KPI0 293 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms