RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 DCAF16Q9NXF7 216 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 SPG11Q96JI7 2443 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 APCP25054 2843 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 NOTCH2Q04721 2471 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 LOC105371267A0A1B0GV96 52 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 TMEM210A6NLX4 147 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 A8MXK9 166 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 C16orf97H3BN30 126 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 DEGS1O15121 323 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 MPPED1O15442 326 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 DEDDO75618 318 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 FGF2P09038 288 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 CTXN2P0C2S0 81 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 PAN3Q58A45 887 aaKnown RBP9.04□□□□□ -0.96
PKP4-206ENST00000452162 HSD17B13Q7Z5P4 300 aaPredicted RBP9.04□□□□□ -0.96
PKP4-206ENST00000452162 LGI3Q8N145 548 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 EIF4E3Q8N5X7 224 aaKnown RBP9.04□□□□□ -0.96
PKP4-206ENST00000452162 LHFPL5Q8TAF8 219 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 TP53RKQ96S44 253 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 SLC5A7Q9GZV3 580 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 OBP2BQ9NPH6 170 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 IGKV1D-13A0A0B4J2D9 117 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 H0YL77 283 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 PHF1O43189 567 aaPredicted RBP9.04□□□□□ -0.96
PKP4-206ENST00000452162 IGKV1-13P0DP09 117 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 HKR1P10072 659 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 TPT1P13693 172 aaKnown RBP9.04□□□□□ -0.96
PKP4-206ENST00000452162 ZNF44P15621 663 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 HLA-DRB3P79483 266 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 P2RY6Q15077 328 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 OR8G1Q15617 311 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 ZNF295-AS1Q8N0V1 137 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 LRRC20Q8TCA0 184 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 WFIKKN1Q96NZ8 548 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 CABLES2Q9BTV7 478 aa9.04□□□□□ -0.96
PKP4-206ENST00000452162 PURGQ9UJV8 347 aaKnown RBP9.04□□□□□ -0.96
PKP4-206ENST00000452162 CSMD2Q7Z408 3487 aa9.03□□□□□ -0.96
PKP4-206ENST00000452162 HEATR1Q9H583 2144 aaKnown RBP9.03□□□□□ -0.96
PKP4-206ENST00000452162 LRBAP50851 2863 aa9.03□□□□□ -0.96
PKP4-206ENST00000452162 C3orf85A0A1B0GTC6 90 aa9.03□□□□□ -0.96
PKP4-206ENST00000452162 TEX46H3BTG2 121 aa9.03□□□□□ -0.96
PKP4-206ENST00000452162 SLC33A1O00400 549 aaPredicted RBP9.03□□□□□ -0.96
PKP4-206ENST00000452162 CDIPTO14735 213 aa9.03□□□□□ -0.96
PKP4-206ENST00000452162 MLNRO43193 412 aa9.03□□□□□ -0.96
PKP4-206ENST00000452162 ACAA1P09110 424 aaPredicted RBP9.03□□□□□ -0.96
PKP4-206ENST00000452162 ZP3P21754 424 aa9.03□□□□□ -0.96
PKP4-206ENST00000452162 TUBG1P23258 451 aa9.03□□□□□ -0.96
PKP4-206ENST00000452162 ZNF146Q15072 292 aa9.03□□□□□ -0.96
PKP4-206ENST00000452162 SHEQ5VZ18 495 aa9.03□□□□□ -0.96
PKP4-206ENST00000452162 FIP1L1Q6UN15 594 aaKnown RBP9.03□□□□□ -0.96
PKP4-206ENST00000452162 ZNF818PQ6ZRF7 136 aa9.03□□□□□ -0.96
PKP4-206ENST00000452162 BHLHA15Q7RTS1 189 aaPredicted RBP9.03□□□□□ -0.96
PKP4-206ENST00000452162 BAP18Q8IXM2 172 aa9.03□□□□□ -0.96
PKP4-206ENST00000452162 BVESQ8NE79 360 aa9.03□□□□□ -0.96
PKP4-206ENST00000452162 OR8G5Q8NG78 346 aa9.03□□□□□ -0.96
PKP4-206ENST00000452162 OR4A4PQ8NGN8 299 aa9.03□□□□□ -0.96
PKP4-206ENST00000452162 SECTM1Q8WVN6 248 aa9.03□□□□□ -0.96
PKP4-206ENST00000452162 TUBG2Q9NRH3 451 aa9.03□□□□□ -0.96
PKP4-206ENST00000452162 TREM2Q9NZC2 230 aa9.03□□□□□ -0.96
PKP4-206ENST00000452162 POLQO75417 2590 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 IGHV1-18A0A0C4DH31 117 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 A0A1B0GW55 424 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 GPR31O00270 319 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 OR2H2O95918 312 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 MBPP02686 304 aaPredicted RBP9.02□□□□□ -0.96
PKP4-206ENST00000452162 DUX4L2P0CJ85 424 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 DUX4L3P0CJ86 424 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 DUX4L4P0CJ87 422 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 DUX4L5P0CJ88 424 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 DUX4L6P0CJ89 424 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 DUX4L7P0CJ90 424 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 RCC1P18754 421 aaPredicted RBP9.02□□□□□ -0.96
PKP4-206ENST00000452162 KITLGP21583 273 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 MDH2P40926 338 aaKnown RBP9.02□□□□□ -0.96
PKP4-206ENST00000452162 TBC1D26Q86UD7 250 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 FOXRED2Q8IWF2 684 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 GAPTQ8N292 157 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 ZNF565Q8N9K5 539 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 PLPPR1Q8TBJ4 325 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 S100PBPQ96BU1 408 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 TMEM222Q9H0R3 208 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 HES4Q9HCC6 221 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 TMEM100Q9NV29 134 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 DUX4Q9UBX2 424 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 PCDHB10Q9UN67 800 aa9.02□□□□□ -0.96
PKP4-206ENST00000452162 IGHV2OR16-5A0A0B4J2B6 119 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 OR5H1A6NKK0 313 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 NPIPB11E5RHQ5 1161 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 K7EPK0 472 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 SIRPB1O00241 398 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 FGF16O43320 207 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 NXPH2O95156 264 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 SRPXP78539 464 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 SMCO1Q147U7 214 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 ZNF497Q6ZNH5 498 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 FAM71E2Q8N5Q1 922 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 SLC35G3Q8N808 338 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 FAM169BQ8N8A8 192 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 TMEM56Q96MV1 263 aa9.02□□□□□ -0.97
PKP4-206ENST00000452162 LINC00052Q96N35 136 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms