RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 DNAH3Q8TD57 4116 aa16.61■□□□□ 0.25
VSX1-206ENST00000444511 A0A1W2PPK0 400 aa16.6■□□□□ 0.25
VSX1-206ENST00000444511 SPINT2O43291 252 aa16.6■□□□□ 0.25
VSX1-206ENST00000444511 TAS2R43P59537 309 aa16.6■□□□□ 0.25
VSX1-206ENST00000444511 DEFB121Q5J5C9 76 aa16.6■□□□□ 0.25
VSX1-206ENST00000444511 FAM53AQ6NSI3 398 aaPredicted RBP16.6■□□□□ 0.25
VSX1-206ENST00000444511 C8orf86Q6ZUL3 223 aa16.6■□□□□ 0.25
VSX1-206ENST00000444511 KLHL30-AS1Q8NEE0 82 aa16.6■□□□□ 0.25
VSX1-206ENST00000444511 RTN4IP1Q8WWV3 396 aaPredicted RBP16.6■□□□□ 0.25
VSX1-206ENST00000444511 LIN7CQ9NUP9 197 aaKnown RBP16.6■□□□□ 0.25
VSX1-206ENST00000444511 ETAA1Q9NY74 926 aa16.6■□□□□ 0.25
VSX1-206ENST00000444511 RCC2Q9P258 522 aaKnown RBP16.6■□□□□ 0.25
VSX1-206ENST00000444511 GNG12Q9UBI6 72 aa16.6■□□□□ 0.25
VSX1-206ENST00000444511 TRBV5-7A0A0A0MS05 114 aa16.59■□□□□ 0.25
VSX1-206ENST00000444511 PNMA8CA0A1B0GUJ8 204 aa16.59■□□□□ 0.25
VSX1-206ENST00000444511 C12orf77C9JDV5 145 aa16.59■□□□□ 0.25
VSX1-206ENST00000444511 AP4M1O00189 453 aa16.59■□□□□ 0.25
VSX1-206ENST00000444511 ST3GAL4Q11206 333 aa16.59■□□□□ 0.25
VSX1-206ENST00000444511 Q3ZCU0 254 aa16.59■□□□□ 0.25
VSX1-206ENST00000444511 C6orf183Q5T699 404 aa16.59■□□□□ 0.25
VSX1-206ENST00000444511 SYT6Q5T7P8 510 aaPredicted RBP16.59■□□□□ 0.25
VSX1-206ENST00000444511 AWAT2Q6E213 333 aa16.59■□□□□ 0.25
VSX1-206ENST00000444511 RAB12Q6IQ22 244 aa16.59■□□□□ 0.25
VSX1-206ENST00000444511 C18orf65Q6ZTR6 163 aa16.59■□□□□ 0.25
VSX1-206ENST00000444511 DHRSXQ8N5I4 330 aa16.59■□□□□ 0.25
VSX1-206ENST00000444511 Q8N6K4 173 aa16.59■□□□□ 0.25
VSX1-206ENST00000444511 ZNF485Q8NCK3 441 aa16.59■□□□□ 0.25
VSX1-206ENST00000444511 GGHQ92820 318 aa16.59■□□□□ 0.25
VSX1-206ENST00000444511 ST6GALNAC6Q969X2 333 aa16.59■□□□□ 0.25
VSX1-206ENST00000444511 MCRIP2Q9BUT9 160 aaKnown RBP16.59■□□□□ 0.25
VSX1-206ENST00000444511 ABCG5Q9H222 651 aa16.59■□□□□ 0.25
VSX1-206ENST00000444511 C8orf4Q9NR00 106 aa16.59■□□□□ 0.25
VSX1-206ENST00000444511 WI2-2373I1.2A0A1W2PRP0 233 aa16.58■□□□□ 0.24
VSX1-206ENST00000444511 LINC01548A6NM66 108 aa16.58■□□□□ 0.24
VSX1-206ENST00000444511 MOSP00540 346 aa16.58■□□□□ 0.24
VSX1-206ENST00000444511 MAS1P04201 325 aa16.58■□□□□ 0.24
VSX1-206ENST00000444511 CD1BP29016 333 aa16.58■□□□□ 0.24
VSX1-206ENST00000444511 MYCNOSP40205 109 aa16.58■□□□□ 0.24
VSX1-206ENST00000444511 GPR12P47775 334 aa16.58■□□□□ 0.24
VSX1-206ENST00000444511 EGFEM1PQ0D2K5 195 aa16.58■□□□□ 0.24
VSX1-206ENST00000444511 TMEM30BQ3MIR4 351 aa16.58■□□□□ 0.24
VSX1-206ENST00000444511 TEX38Q6PEX7 206 aa16.58■□□□□ 0.24
VSX1-206ENST00000444511 ZNF695Q8IW36 515 aa16.58■□□□□ 0.24
VSX1-206ENST00000444511 PRR18Q8N4B5 295 aa16.58■□□□□ 0.24
VSX1-206ENST00000444511 PACRGLQ8N7B6 248 aa16.58■□□□□ 0.24
VSX1-206ENST00000444511 Q8N9W7 124 aa16.58■□□□□ 0.24
VSX1-206ENST00000444511 TMEM104Q8NE00 496 aa16.58■□□□□ 0.24
VSX1-206ENST00000444511 OR4K15Q8NH41 348 aa16.58■□□□□ 0.24
VSX1-206ENST00000444511 BANF2Q9H503 90 aa16.58■□□□□ 0.24
VSX1-206ENST00000444511 PEX16Q9Y5Y5 336 aa16.58■□□□□ 0.24
VSX1-206ENST00000444511 EFCAB10A6NFE3 127 aa16.57■□□□□ 0.24
VSX1-206ENST00000444511 SLC31A2O15432 143 aa16.57■□□□□ 0.24
VSX1-206ENST00000444511 TXNL1O43396 289 aa16.57■□□□□ 0.24
VSX1-206ENST00000444511 ADARB1P78563 741 aaKnown RBP16.57■□□□□ 0.24
VSX1-206ENST00000444511 TRAT1Q6PIZ9 186 aa16.57■□□□□ 0.24
VSX1-206ENST00000444511 SLC25A48Q6ZT89 311 aaKnown RBP16.57■□□□□ 0.24
VSX1-206ENST00000444511 CDH26Q8IXH8 852 aa16.57■□□□□ 0.24
VSX1-206ENST00000444511 OR10V1Q8NGI7 309 aa16.57■□□□□ 0.24
VSX1-206ENST00000444511 RASL11BQ9BPW5 248 aa16.57■□□□□ 0.24
VSX1-206ENST00000444511 GON7Q9BXV9 100 aa16.57■□□□□ 0.24
VSX1-206ENST00000444511 SELENOIQ9C0D9 397 aa16.57■□□□□ 0.24
VSX1-206ENST00000444511 CRTAPO75718 401 aaPredicted RBP16.56■□□□□ 0.24
VSX1-206ENST00000444511 HBZP02008 142 aa16.56■□□□□ 0.24
VSX1-206ENST00000444511 MGMTP16455 207 aa16.56■□□□□ 0.24
VSX1-206ENST00000444511 CAPGP40121 348 aa16.56■□□□□ 0.24
VSX1-206ENST00000444511 DOC2BQ14184 412 aa16.56■□□□□ 0.24
VSX1-206ENST00000444511 PNLIPRP3Q17RR3 467 aa16.56■□□□□ 0.24
VSX1-206ENST00000444511 ZNF439Q8NDP4 499 aa16.56■□□□□ 0.24
VSX1-206ENST00000444511 OR8H1Q8NGG4 311 aa16.56■□□□□ 0.24
VSX1-206ENST00000444511 OR1L1Q8NH94 360 aa16.56■□□□□ 0.24
VSX1-206ENST00000444511 DERL3Q96Q80 235 aa16.56■□□□□ 0.24
VSX1-206ENST00000444511 S1PR3Q99500 378 aa16.56■□□□□ 0.24
VSX1-206ENST00000444511 P2RX4Q99571 388 aa16.56■□□□□ 0.24
VSX1-206ENST00000444511 CNOT2Q9NZN8 540 aaKnown RBP16.56■□□□□ 0.24
VSX1-206ENST00000444511 FAM90A10PA6NDY2 464 aa16.55■□□□□ 0.24
VSX1-206ENST00000444511 FAM90A7PA6NKC0 464 aa16.55■□□□□ 0.24
VSX1-206ENST00000444511 FAM90A23PA8MXZ1 464 aa16.55■□□□□ 0.24
VSX1-206ENST00000444511 ZNF736B4DX44 427 aaPredicted RBP16.55■□□□□ 0.24
VSX1-206ENST00000444511 MYL12BO14950 172 aa16.55■□□□□ 0.24
VSX1-206ENST00000444511 RRP9O43818 475 aaKnown RBP16.55■□□□□ 0.24
VSX1-206ENST00000444511 CA11O75493 328 aa16.55■□□□□ 0.24
VSX1-206ENST00000444511 RCC1P18754 421 aaPredicted RBP16.55■□□□□ 0.24
VSX1-206ENST00000444511 CELP19835 753 aa16.55■□□□□ 0.24
VSX1-206ENST00000444511 ZNF137PP52743 207 aa16.55■□□□□ 0.24
VSX1-206ENST00000444511 CT45A1Q5HYN5 189 aa16.55■□□□□ 0.24
VSX1-206ENST00000444511 GAPTQ8N292 157 aa16.55■□□□□ 0.24
VSX1-206ENST00000444511 CT45A3Q8NHU0 189 aa16.55■□□□□ 0.24
VSX1-206ENST00000444511 PLSCR3Q9NRY6 295 aa16.55■□□□□ 0.24
VSX1-206ENST00000444511 UBE2QL1A1L167 161 aa16.54■□□□□ 0.24
VSX1-206ENST00000444511 RPLP1P05386 114 aaKnown RBP16.54■□□□□ 0.24
VSX1-206ENST00000444511 GLAP06280 429 aa16.54■□□□□ 0.24
VSX1-206ENST00000444511 FUT3P21217 361 aa16.54■□□□□ 0.24
VSX1-206ENST00000444511 ZNF134P52741 427 aa16.54■□□□□ 0.24
VSX1-206ENST00000444511 WNT4P56705 351 aa16.54■□□□□ 0.24
VSX1-206ENST00000444511 RAB25P57735 213 aa16.54■□□□□ 0.24
VSX1-206ENST00000444511 GPR50Q13585 617 aa16.54■□□□□ 0.24
VSX1-206ENST00000444511 CXorf66Q5JRM2 361 aaPredicted RBP16.54■□□□□ 0.24
VSX1-206ENST00000444511 UNQ9370/PRO34162Q6UXP9 181 aa16.54■□□□□ 0.24
VSX1-206ENST00000444511 AHSA2Q719I0 299 aa16.54■□□□□ 0.24
VSX1-206ENST00000444511 C8orf59Q8N0T1 100 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms