RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 GAPDHP04406 335 aaKnown RBP13.45□□□□□ -0.26
CPSF4-203ENST00000430038 GTF2F2P13984 249 aa13.45□□□□□ -0.26
CPSF4-203ENST00000430038 RCC1P18754 421 aaPredicted RBP13.45□□□□□ -0.26
CPSF4-203ENST00000430038 MYL12AP19105 171 aa13.45□□□□□ -0.26
CPSF4-203ENST00000430038 YIF1BQ5BJH7 314 aa13.45□□□□□ -0.26
CPSF4-203ENST00000430038 SYT6Q5T7P8 510 aaPredicted RBP13.45□□□□□ -0.26
CPSF4-203ENST00000430038 LINC00596Q86U02 117 aa13.45□□□□□ -0.26
CPSF4-203ENST00000430038 FBLIM1Q8WUP2 373 aa13.45□□□□□ -0.26
CPSF4-203ENST00000430038 RTN4IP1Q8WWV3 396 aaPredicted RBP13.45□□□□□ -0.26
CPSF4-203ENST00000430038 DERL3Q96Q80 235 aa13.45□□□□□ -0.26
CPSF4-203ENST00000430038 MRPS28Q9Y2Q9 187 aaKnown RBP13.45□□□□□ -0.26
CPSF4-203ENST00000430038 KMT2CQ8NEZ4 4911 aaKnown RBP13.44□□□□□ -0.26
CPSF4-203ENST00000430038 SERPINE3A8MV23 424 aa13.44□□□□□ -0.26
CPSF4-203ENST00000430038 AIPO00170 330 aa13.44□□□□□ -0.26
CPSF4-203ENST00000430038 F2RL1P55085 397 aa13.44□□□□□ -0.26
CPSF4-203ENST00000430038 SLC35A2P78381 396 aa13.44□□□□□ -0.26
CPSF4-203ENST00000430038 EGFEM1PQ0D2K5 195 aa13.44□□□□□ -0.26
CPSF4-203ENST00000430038 TTC23Q5W5X9 447 aa13.44□□□□□ -0.26
CPSF4-203ENST00000430038 SLC25A48Q6ZT89 311 aaKnown RBP13.44□□□□□ -0.26
CPSF4-203ENST00000430038 SLC35E3Q7Z769 313 aa13.44□□□□□ -0.26
CPSF4-203ENST00000430038 IZUMO1Q8IYV9 350 aa13.44□□□□□ -0.26
CPSF4-203ENST00000430038 STPG2Q8N412 459 aa13.44□□□□□ -0.26
CPSF4-203ENST00000430038 DHRSXQ8N5I4 330 aa13.44□□□□□ -0.26
CPSF4-203ENST00000430038 JAGN1Q8N5M9 183 aa13.44□□□□□ -0.26
CPSF4-203ENST00000430038 C8orf31Q8N9H6 132 aa13.44□□□□□ -0.26
CPSF4-203ENST00000430038 OR10V1Q8NGI7 309 aa13.44□□□□□ -0.26
CPSF4-203ENST00000430038 CHPT1Q8WUD6 406 aa13.44□□□□□ -0.26
CPSF4-203ENST00000430038 RCC1LQ96I51 464 aaKnown RBP13.44□□□□□ -0.26
CPSF4-203ENST00000430038 S100A13Q99584 98 aa13.44□□□□□ -0.26
CPSF4-203ENST00000430038 HSPB9Q9BQS6 159 aa13.44□□□□□ -0.26
CPSF4-203ENST00000430038 PSORS1C1Q9UIG5 152 aa13.44□□□□□ -0.26
CPSF4-203ENST00000430038 IRGMA1A4Y4 181 aa13.43□□□□□ -0.26
CPSF4-203ENST00000430038 UBE2QL1A1L167 161 aa13.43□□□□□ -0.26
CPSF4-203ENST00000430038 ZNF780AO75290 641 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-203ENST00000430038 HBZP02008 142 aa13.43□□□□□ -0.26
CPSF4-203ENST00000430038 GPR12P47775 334 aa13.43□□□□□ -0.26
CPSF4-203ENST00000430038 RAB12Q6IQ22 244 aa13.43□□□□□ -0.26
CPSF4-203ENST00000430038 NEK7Q8TDX7 302 aa13.43□□□□□ -0.26
CPSF4-203ENST00000430038 RITA1Q96K30 269 aa13.43□□□□□ -0.26
CPSF4-203ENST00000430038 Q96M66 194 aa13.43□□□□□ -0.26
CPSF4-203ENST00000430038 P2RX4Q99571 388 aa13.43□□□□□ -0.26
CPSF4-203ENST00000430038 ABCG5Q9H222 651 aa13.43□□□□□ -0.26
CPSF4-203ENST00000430038 FKBP14Q9NWM8 211 aa13.43□□□□□ -0.26
CPSF4-203ENST00000430038 PAK1IP1Q9NWT1 392 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-203ENST00000430038 PEX16Q9Y5Y5 336 aa13.43□□□□□ -0.26
CPSF4-203ENST00000430038 NCBP2LA6PVI3 153 aaKnown RBP13.42□□□□□ -0.26
CPSF4-203ENST00000430038 SC5DO75845 299 aa13.42□□□□□ -0.26
CPSF4-203ENST00000430038 RPLP1P05386 114 aaKnown RBP13.42□□□□□ -0.26
CPSF4-203ENST00000430038 CELP19835 753 aa13.42□□□□□ -0.26
CPSF4-203ENST00000430038 GNMTQ14749 295 aa13.42□□□□□ -0.26
CPSF4-203ENST00000430038 RCN1Q15293 331 aa13.42□□□□□ -0.26
CPSF4-203ENST00000430038 FAM27D1Q5T7N8 215 aa13.42□□□□□ -0.26
CPSF4-203ENST00000430038 AHSA2Q719I0 299 aa13.42□□□□□ -0.26
CPSF4-203ENST00000430038 TGIF2LXQ8IUE1 241 aa13.42□□□□□ -0.26
CPSF4-203ENST00000430038 PRR18Q8N4B5 295 aa13.42□□□□□ -0.26
CPSF4-203ENST00000430038 NANOGP1Q8N7R0 232 aa13.42□□□□□ -0.26
CPSF4-203ENST00000430038 RAX2Q96IS3 184 aa13.42□□□□□ -0.26
CPSF4-203ENST00000430038 SELENOIQ9C0D9 397 aa13.42□□□□□ -0.26
CPSF4-203ENST00000430038 ETAA1Q9NY74 926 aa13.42□□□□□ -0.26
CPSF4-203ENST00000430038 MCRIP1C9JLW8 97 aa13.41□□□□□ -0.26
CPSF4-203ENST00000430038 MGMTP16455 207 aa13.41□□□□□ -0.26
CPSF4-203ENST00000430038 CD1BP29016 333 aa13.41□□□□□ -0.26
CPSF4-203ENST00000430038 ZNF137PP52743 207 aa13.41□□□□□ -0.26
CPSF4-203ENST00000430038 AWAT2Q6E213 333 aa13.41□□□□□ -0.26
CPSF4-203ENST00000430038 OR10K2Q6IF99 312 aa13.41□□□□□ -0.26
CPSF4-203ENST00000430038 C11orf87Q6NUJ2 197 aa13.41□□□□□ -0.26
CPSF4-203ENST00000430038 ODF3L1Q8IXM7 274 aa13.41□□□□□ -0.26
CPSF4-203ENST00000430038 FAM71E2Q8N5Q1 922 aa13.41□□□□□ -0.26
CPSF4-203ENST00000430038 PACRGLQ8N7B6 248 aa13.41□□□□□ -0.26
CPSF4-203ENST00000430038 BPIFB6Q8NFQ5 453 aa13.41□□□□□ -0.26
CPSF4-203ENST00000430038 OR52L2PQ8NGH6 319 aa13.41□□□□□ -0.26
CPSF4-203ENST00000430038 OR2T10Q8NGZ9 312 aa13.41□□□□□ -0.26
CPSF4-203ENST00000430038 S1PR3Q99500 378 aa13.41□□□□□ -0.26
CPSF4-203ENST00000430038 KCNK15Q9H427 330 aa13.41□□□□□ -0.26
CPSF4-203ENST00000430038 PLCXD1Q9NUJ7 323 aa13.41□□□□□ -0.26
CPSF4-203ENST00000430038 CHCHD3Q9NX63 227 aaKnown RBP13.41□□□□□ -0.26
CPSF4-203ENST00000430038 TRAPPC2LQ9UL33 140 aa13.41□□□□□ -0.26
CPSF4-203ENST00000430038 EFCAB10A6NFE3 127 aa13.4□□□□□ -0.26
CPSF4-203ENST00000430038 MOSP00540 346 aa13.4□□□□□ -0.26
CPSF4-203ENST00000430038 CAPGP40121 348 aa13.4□□□□□ -0.26
CPSF4-203ENST00000430038 WNT4P56705 351 aa13.4□□□□□ -0.26
CPSF4-203ENST00000430038 CFHR3Q02985 330 aa13.4□□□□□ -0.26
CPSF4-203ENST00000430038 GPR176Q14439 515 aa13.4□□□□□ -0.26
CPSF4-203ENST00000430038 DEFB136Q30KP8 78 aa13.4□□□□□ -0.26
CPSF4-203ENST00000430038 MORN2Q502X0 79 aa13.4□□□□□ -0.26
CPSF4-203ENST00000430038 OGFRL1Q5TC84 451 aaPredicted RBP13.4□□□□□ -0.26
CPSF4-203ENST00000430038 UNQ9370/PRO34162Q6UXP9 181 aa13.4□□□□□ -0.26
CPSF4-203ENST00000430038 SETD9Q8NE22 299 aa13.4□□□□□ -0.26
CPSF4-203ENST00000430038 KLHL30-AS1Q8NEE0 82 aa13.4□□□□□ -0.26
CPSF4-203ENST00000430038 MRPL30Q8TCC3 161 aaKnown RBP13.4□□□□□ -0.26
CPSF4-203ENST00000430038 FAM46BQ96A09 425 aa13.4□□□□□ -0.26
CPSF4-203ENST00000430038 MRPS24Q96EL2 167 aaKnown RBP13.4□□□□□ -0.26
CPSF4-203ENST00000430038 DCLRE1BQ9H816 532 aa13.4□□□□□ -0.26
CPSF4-203ENST00000430038 TAF9BQ9HBM6 251 aa13.4□□□□□ -0.26
CPSF4-203ENST00000430038 MBNL3Q9NUK0 354 aaKnown RBP13.4□□□□□ -0.26
CPSF4-203ENST00000430038 LIN7CQ9NUP9 197 aaKnown RBP13.4□□□□□ -0.26
CPSF4-203ENST00000430038 CNOT2Q9NZN8 540 aaKnown RBP13.4□□□□□ -0.26
CPSF4-203ENST00000430038 CKLFQ9UBR5 152 aa13.4□□□□□ -0.26
CPSF4-203ENST00000430038 NBEAL2Q6ZNJ1 2754 aa13.39□□□□□ -0.27
CPSF4-203ENST00000430038 ANKRD65E5RJM6 399 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms