RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 GLYATL2Q8WU03 294 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 SLC38A4Q969I6 547 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 MRPL24Q96A35 216 aaKnown RBP3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 TMEM186Q96B77 213 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 WDR34Q96EX3 536 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 RNF170Q96K19 258 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 ZNF382Q96SR6 550 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 STACQ99469 402 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 NIPSNAP1Q9BPW8 284 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 INPP5KQ9BT40 448 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 TMEM208Q9BTX3 173 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 NDUFAF3Q9BU61 184 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 TMEM109Q9BVC6 243 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 NXF5Q9H1B4 397 aaKnown RBP3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 METTL17Q9H7H0 456 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 FN3KRPQ9HA64 309 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 MED9Q9NWA0 146 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 MED29Q9NX70 200 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 ANAPC11Q9NYG5 84 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 AHSPQ9NZD4 102 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 THYN1Q9P016 225 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 METTL1Q9UBP6 276 aaKnown RBP3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 ZNF346Q9UL40 294 aaKnown RBP3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 TBC1D24Q9ULP9 559 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 ING4Q9UNL4 249 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 PSG11Q9UQ72 335 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 OARD1Q9Y530 152 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 HSPB11Q9Y547 144 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 NPTNQ9Y639 398 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 WNK1Q9H4A3 2382 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 VWFP04275 2813 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 CMYA5Q8N3K9 4069 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 NBEAL2Q6ZNJ1 2754 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 C20orf202A1L168 122 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 SMCO3A2RU48 225 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 B4DSR2 109 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 PRSS46E5RG02 174 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 E7EQL1 145 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 K7EP13 123 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 MLNRO43193 412 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 TPST1O60507 370 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 GCM2O75603 506 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 STK16O75716 305 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 SNAPC5O75971 98 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 KCNK2O95069 426 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 TTC4O95801 387 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 FADS2O95864 444 aaKnown RBP3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 TXNDC12O95881 172 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 NBEAP1P0C6P0 100 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 MYL2P10916 166 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 ANXA3P12429 323 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 GTF2F2P13984 249 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 SERPINA2P20848 420 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 ZBTB25P24278 435 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 CDX1P47902 265 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 RPL14P50914 215 aaKnown RBP3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 RORCP51449 518 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 CDKN2DP55273 166 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 KLF3P57682 345 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 RAP1AP62834 184 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 BST1Q10588 318 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 PDZK1IP1Q13113 114 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 TATDN3Q17R31 274 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 ALKBH6Q3KRA9 238 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 COX19Q49B96 90 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 C5orf47Q569G3 176 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 RBM48Q5RL73 367 aaKnown RBP3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 MUC21Q5SSG8 566 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 C9orf135Q5VTT2 229 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 TEX261Q6UWH6 196 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 Q6ZT83 130 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 GRINAQ7Z429 371 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 TMED4Q7Z7H5 227 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 ZNF546Q86UE3 836 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 HS3ST5Q8IZT8 346 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 PUSL1Q8N0Z8 303 aaKnown RBP3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 FADS6Q8N9I5 356 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 OR9Q1Q8NGQ5 310 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 OR1B1Q8NGR6 318 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 FAM110BQ8TC76 370 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 DOK4Q8TEW6 326 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 UBTD2Q8WUN7 234 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 DCAKDQ8WVC6 231 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 C1orf54Q8WWF1 131 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 ACOT12Q8WYK0 555 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 FAM46BQ96A09 425 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 BPIFA2Q96DR5 249 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 CERS2Q96G23 380 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 AKR1E2Q96JD6 320 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 C4orf36Q96KX1 117 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 LINC00052Q96N35 136 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 GINS4Q9BRT9 223 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 SUCNR1Q9BXA5 334 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 ANKRD60Q9BZ19 345 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 SRRQ9GZT4 340 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 ARV1Q9H2C2 271 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 SLC38A1Q9H2H9 487 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 DSN1Q9H410 356 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 NANOGQ9H9S0 305 aa3.48□□□□□ -1.85
HMGB3P5-201ENST00000428894 MEAF6Q9HAF1 191 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms