RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 MPIG6BO95866 241 aa16.56■□□□□ 0.24
HSPG2-205ENST00000427897 PSMB9P28065 219 aa16.56■□□□□ 0.24
HSPG2-205ENST00000427897 C9orf152Q5JTZ5 239 aa16.56■□□□□ 0.24
HSPG2-205ENST00000427897 TRAT1Q6PIZ9 186 aa16.56■□□□□ 0.24
HSPG2-205ENST00000427897 CENPVQ7Z7K6 275 aaPredicted RBP16.56■□□□□ 0.24
HSPG2-205ENST00000427897 Q8N2B8 174 aa16.56■□□□□ 0.24
HSPG2-205ENST00000427897 TMEM104Q8NE00 496 aa16.56■□□□□ 0.24
HSPG2-205ENST00000427897 RBM14Q96PK6 669 aaKnown RBP16.56■□□□□ 0.24
HSPG2-205ENST00000427897 SERTAD4Q9NUC0 356 aa16.56■□□□□ 0.24
HSPG2-205ENST00000427897 KCNIP1Q9NZI2 227 aa16.56■□□□□ 0.24
HSPG2-205ENST00000427897 A0A1W2PPE3 182 aa16.55■□□□□ 0.24
HSPG2-205ENST00000427897 CA11O75493 328 aa16.55■□□□□ 0.24
HSPG2-205ENST00000427897 OR2F2O95006 317 aa16.55■□□□□ 0.24
HSPG2-205ENST00000427897 GLAP06280 429 aa16.55■□□□□ 0.24
HSPG2-205ENST00000427897 LPLP06858 475 aa16.55■□□□□ 0.24
HSPG2-205ENST00000427897 IL3RAP26951 378 aa16.55■□□□□ 0.24
HSPG2-205ENST00000427897 NSUN5P1Q3KNT7 163 aa16.55■□□□□ 0.24
HSPG2-205ENST00000427897 ABCA11PQ4W5N1 156 aa16.55■□□□□ 0.24
HSPG2-205ENST00000427897 NKAPLQ5M9Q1 402 aa16.55■□□□□ 0.24
HSPG2-205ENST00000427897 UTF1Q5T230 341 aa16.55■□□□□ 0.24
HSPG2-205ENST00000427897 OR52M1Q8NGK5 317 aa16.55■□□□□ 0.24
HSPG2-205ENST00000427897 RCC2Q9P258 522 aaKnown RBP16.55■□□□□ 0.24
HSPG2-205ENST00000427897 GNG12Q9UBI6 72 aa16.55■□□□□ 0.24
HSPG2-205ENST00000427897 IGHV3-43A0A0B4J1X8 118 aa16.54■□□□□ 0.24
HSPG2-205ENST00000427897 M0QZK8 103 aa16.54■□□□□ 0.24
HSPG2-205ENST00000427897 CCRL2O00421 344 aa16.54■□□□□ 0.24
HSPG2-205ENST00000427897 PDCD6O75340 191 aa16.54■□□□□ 0.24
HSPG2-205ENST00000427897 ARL6IP5O75915 188 aa16.54■□□□□ 0.24
HSPG2-205ENST00000427897 GAPDHP04406 335 aaKnown RBP16.54■□□□□ 0.24
HSPG2-205ENST00000427897 IGHV3-43DP0DP04 118 aa16.54■□□□□ 0.24
HSPG2-205ENST00000427897 HTR2CP28335 458 aa16.54■□□□□ 0.24
HSPG2-205ENST00000427897 MOB3BQ86TA1 216 aa16.54■□□□□ 0.24
HSPG2-205ENST00000427897 OR8H3Q8N146 312 aa16.54■□□□□ 0.24
HSPG2-205ENST00000427897 OR56B4Q8NH76 319 aa16.54■□□□□ 0.24
HSPG2-205ENST00000427897 KCNG3Q8TAE7 436 aa16.54■□□□□ 0.24
HSPG2-205ENST00000427897 Q96M66 194 aa16.54■□□□□ 0.24
HSPG2-205ENST00000427897 TMEM59Q9BXS4 323 aa16.54■□□□□ 0.24
HSPG2-205ENST00000427897 PLGRKTQ9HBL7 147 aa16.54■□□□□ 0.24
HSPG2-205ENST00000427897 NDUFB11Q9NX14 153 aa16.54■□□□□ 0.24
HSPG2-205ENST00000427897 C15orf65H3BRN8 121 aa16.53■□□□□ 0.24
HSPG2-205ENST00000427897 SNRNP70P08621 437 aaKnown RBP16.53■□□□□ 0.24
HSPG2-205ENST00000427897 UCHL1P09936 223 aa16.53■□□□□ 0.24
HSPG2-205ENST00000427897 TMEM11P17152 192 aa16.53■□□□□ 0.24
HSPG2-205ENST00000427897 NEDD8Q15843 81 aa16.53■□□□□ 0.24
HSPG2-205ENST00000427897 Q6ZS46 218 aa16.53■□□□□ 0.24
HSPG2-205ENST00000427897 LRRTM1Q86UE6 522 aa16.53■□□□□ 0.24
HSPG2-205ENST00000427897 THNSL2Q86YJ6 484 aa16.53■□□□□ 0.24
HSPG2-205ENST00000427897 DRAM1Q8N682 238 aa16.53■□□□□ 0.24
HSPG2-205ENST00000427897 CFHR4Q92496 578 aa16.53■□□□□ 0.24
HSPG2-205ENST00000427897 GFOD1Q9NXC2 390 aa16.53■□□□□ 0.24
HSPG2-205ENST00000427897 RANBP1P43487 201 aa16.52■□□□□ 0.24
HSPG2-205ENST00000427897 RPS25P62851 125 aaKnown RBP16.52■□□□□ 0.24
HSPG2-205ENST00000427897 DEFA6Q01524 100 aa16.52■□□□□ 0.24
HSPG2-205ENST00000427897 HNF4GQ14541 408 aa16.52■□□□□ 0.24
HSPG2-205ENST00000427897 TMEM30BQ3MIR4 351 aa16.52■□□□□ 0.24
HSPG2-205ENST00000427897 C1orf100Q5SVJ3 147 aa16.52■□□□□ 0.24
HSPG2-205ENST00000427897 HIST2H2BDQ6DRA6 164 aa16.52■□□□□ 0.24
HSPG2-205ENST00000427897 OR10K2Q6IF99 312 aa16.52■□□□□ 0.24
HSPG2-205ENST00000427897 LYPD6Q86Y78 171 aa16.52■□□□□ 0.24
HSPG2-205ENST00000427897 LYG1Q8N1E2 194 aa16.52■□□□□ 0.24
HSPG2-205ENST00000427897 MOB4Q9Y3A3 225 aa16.52■□□□□ 0.24
HSPG2-205ENST00000427897 TRIM64CA6NLI5 447 aa16.51■□□□□ 0.23
HSPG2-205ENST00000427897 C12orf77C9JDV5 145 aa16.51■□□□□ 0.23
HSPG2-205ENST00000427897 HSD17B6O14756 317 aa16.51■□□□□ 0.23
HSPG2-205ENST00000427897 SC5DO75845 299 aa16.51■□□□□ 0.23
HSPG2-205ENST00000427897 HBZP02008 142 aa16.51■□□□□ 0.23
HSPG2-205ENST00000427897 VSIG8P0DPA2 414 aa16.51■□□□□ 0.23
HSPG2-205ENST00000427897 CD28P10747 220 aa16.51■□□□□ 0.23
HSPG2-205ENST00000427897 RCC1P18754 421 aaPredicted RBP16.51■□□□□ 0.23
HSPG2-205ENST00000427897 REG1BP48304 166 aa16.51■□□□□ 0.23
HSPG2-205ENST00000427897 GP2P55259 537 aaKnown RBP16.51■□□□□ 0.23
HSPG2-205ENST00000427897 SSX1Q16384 188 aa16.51■□□□□ 0.23
HSPG2-205ENST00000427897 TMEM95Q3KNT9 176 aa16.51■□□□□ 0.23
HSPG2-205ENST00000427897 OR5AU1Q8NGC0 362 aa16.51■□□□□ 0.23
HSPG2-205ENST00000427897 OR10V1Q8NGI7 309 aa16.51■□□□□ 0.23
HSPG2-205ENST00000427897 OR6M1Q8NGM8 313 aa16.51■□□□□ 0.23
HSPG2-205ENST00000427897 OCSTAMPQ9BR26 566 aa16.51■□□□□ 0.23
HSPG2-205ENST00000427897 URM1Q9BTM9 101 aaKnown RBP16.51■□□□□ 0.23
HSPG2-205ENST00000427897 TAF9BQ9HBM6 251 aa16.51■□□□□ 0.23
HSPG2-205ENST00000427897 CHMP1AQ9HD42 196 aaPredicted RBP16.51■□□□□ 0.23
HSPG2-205ENST00000427897 GALP22466 123 aa16.5■□□□□ 0.23
HSPG2-205ENST00000427897 DIAPH2-AS1Q14236 149 aa16.5■□□□□ 0.23
HSPG2-205ENST00000427897 FAAP24Q9BTP7 215 aa16.5■□□□□ 0.23
HSPG2-205ENST00000427897 OR2S2Q9NQN1 319 aa16.5■□□□□ 0.23
HSPG2-205ENST00000427897 AK6Q9Y3D8 172 aaKnown RBP16.5■□□□□ 0.23
HSPG2-205ENST00000427897 A0A1W2PPI3 338 aa16.49■□□□□ 0.23
HSPG2-205ENST00000427897 SH2D7A6NKC9 451 aaPredicted RBP16.49■□□□□ 0.23
HSPG2-205ENST00000427897 BPNT1O95861 308 aa16.49■□□□□ 0.23
HSPG2-205ENST00000427897 IGKV1D-33P01593 117 aa16.49■□□□□ 0.23
HSPG2-205ENST00000427897 IGKV1-33P01594 117 aa16.49■□□□□ 0.23
HSPG2-205ENST00000427897 ARSBP15848 533 aa16.49■□□□□ 0.23
HSPG2-205ENST00000427897 CALRP27797 417 aaKnown RBP16.49■□□□□ 0.23
HSPG2-205ENST00000427897 BLVRBP30043 206 aaPredicted RBP16.49■□□□□ 0.23
HSPG2-205ENST00000427897 LOXL3P58215 753 aa16.49■□□□□ 0.23
HSPG2-205ENST00000427897 RPS27AP62979 156 aaKnown RBP16.49■□□□□ 0.23
HSPG2-205ENST00000427897 ZNF816Q0VGE8 651 aaPredicted RBP16.49■□□□□ 0.23
HSPG2-205ENST00000427897 Q3ZCU0 254 aa16.49■□□□□ 0.23
HSPG2-205ENST00000427897 SIGIRRQ6IA17 410 aa16.49■□□□□ 0.23
HSPG2-205ENST00000427897 NDUFA11Q86Y39 141 aa16.49■□□□□ 0.23
HSPG2-205ENST00000427897 LINC00311Q8N616 119 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms