RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 ADORA2BP29275 332 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 PYCR1P32322 319 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 NKX2-1P43699 371 aaPredicted RBP2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 SLC6A8P48029 635 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 TMEM33P57088 247 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 RPL23AP62750 156 aaKnown RBP2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 POLR2LP62875 67 aaKnown RBP2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 PAX2Q02962 417 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 ZNF763Q0D2J5 394 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 ST3GAL3Q11203 375 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 NFATC2Q13469 925 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 CRMP1Q14194 572 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 ENDOGQ14249 297 aaKnown RBP2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 VAMP3Q15836 100 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 PRSS8Q16651 343 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 UPP1Q16831 310 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 C5orf64Q2M2E5 130 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 SNAI3Q3KNW1 292 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 KRTAP13-3Q3SY46 172 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 SLC22A6Q4U2R8 563 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 LRRC73Q5JTD7 316 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 ZNF506Q5JVG8 444 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 FAM27D1Q5T7N8 215 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 AADACL3Q5VUY0 350 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 LYPLAL1Q5VWZ2 237 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 RPL7L1Q6DKI1 246 aaKnown RBP2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 FAM151BQ6UXP7 276 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 UNQ9370/PRO34162Q6UXP9 181 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 DPPA3Q6W0C5 159 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 GLT6D1Q7Z4J2 308 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 VASH2Q86V25 355 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 ZNF429Q86V71 674 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 NIT1Q86X76 327 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 GKN2Q86XP6 184 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 ZNF584Q8IVC4 421 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 NRMQ8IXM6 262 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 RNF175Q8N4F7 328 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 TMEM156Q8N614 296 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 TEX26Q8N6G2 289 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 TCTEX1D1Q8N7M0 179 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 ZSCAN4Q8NAM6 433 aaPredicted RBP2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 NUP37Q8NFH4 326 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 OR51D1Q8NGF3 324 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 OR10W1Q8NGF6 305 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 OR5A2Q8NGI9 324 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 ZNF519Q8TB69 540 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 GPR148Q8TDV2 347 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 TSACCQ96A04 125 aaPredicted RBP2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 APH1AQ96BI3 265 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 PINX1Q96BK5 328 aaKnown RBP2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 GPR146Q96CH1 333 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 RASD2Q96D21 266 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 SEC22AQ96IW7 307 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 C2orf50Q96LR7 162 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 PRAP1Q96NZ9 151 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 DERL3Q96Q80 235 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 ATP6V0BQ99437 205 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 VGLL1Q99990 258 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 GINS3Q9BRX5 216 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 SPXQ9BT56 116 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 SCRT1Q9BWW7 348 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 GPR174Q9BXC1 333 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 EBPLQ9BY08 206 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 PKIBQ9C010 78 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 MAP1LC3BQ9GZQ8 125 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 ISG20L2Q9H9L3 353 aaKnown RBP2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 WFDC1Q9HC57 220 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 TUBG2Q9NRH3 451 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 MRPL22Q9NWU5 206 aaKnown RBP2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 ZNF586Q9NXT0 402 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 CNIH4Q9P003 139 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 P2RX2Q9UBL9 471 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 VPS29Q9UBQ0 182 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 CLN8Q9UBY8 286 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 OR5V1Q9UGF6 321 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 RAB22AQ9UL26 194 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 SLC22A13Q9Y226 551 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 KCNK6Q9Y257 313 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 MRPS33Q9Y291 106 aaKnown RBP2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 MRPS16Q9Y3D3 137 aaKnown RBP2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 AK6Q9Y3D8 172 aaKnown RBP2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 WIPI2Q9Y4P8 454 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 URGCP-MRPS24S4R325 110 aa2.78□□□□□ -1.96
SDCBPP3-201ENST00000419629 BRCA1P38398 1863 aaKnown RBP2.77□□□□□ -1.97
SDCBPP3-201ENST00000419629 NUP98P52948 1817 aa2.77□□□□□ -1.97
SDCBPP3-201ENST00000419629 TRBV2A0A0J9YWF9 115 aa2.77□□□□□ -1.97
SDCBPP3-201ENST00000419629 C13orf42A0A1B0GVH6 325 aa2.77□□□□□ -1.97
SDCBPP3-201ENST00000419629 A0A1W2PRS3 328 aa2.77□□□□□ -1.97
SDCBPP3-201ENST00000419629 RBFOX3A6NFN3 312 aa2.77□□□□□ -1.97
SDCBPP3-201ENST00000419629 CASTOR2A6NHX0 329 aa2.77□□□□□ -1.97
SDCBPP3-201ENST00000419629 VSTM2BA6NLU5 285 aa2.77□□□□□ -1.97
SDCBPP3-201ENST00000419629 ZNF727A8MUV8 499 aa2.77□□□□□ -1.97
SDCBPP3-201ENST00000419629 PRAMEF26H0Y7S4 382 aa2.77□□□□□ -1.97
SDCBPP3-201ENST00000419629 CCL22O00626 93 aa2.77□□□□□ -1.97
SDCBPP3-201ENST00000419629 HSD17B6O14756 317 aa2.77□□□□□ -1.97
SDCBPP3-201ENST00000419629 TAPBPO15533 448 aa2.77□□□□□ -1.97
SDCBPP3-201ENST00000419629 RBFOX2O43251 390 aaKnown RBP eCLIP2.77□□□□□ -1.97
SDCBPP3-201ENST00000419629 TRAF3IP2O43734 574 aaPredicted RBP2.77□□□□□ -1.97
SDCBPP3-201ENST00000419629 OR7C2O60412 319 aa2.77□□□□□ -1.97
SDCBPP3-201ENST00000419629 FCMRO60667 390 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms