RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 NDUFB11Q9NX14 153 aa16.28■□□□□ 0.2
GTF3A-202ENST00000419181 GFOD1Q9NXC2 390 aa16.28■□□□□ 0.2
GTF3A-202ENST00000419181 SDCBPO00560 298 aaPredicted RBP16.27■□□□□ 0.2
GTF3A-202ENST00000419181 TIMM23O14925 209 aa16.27■□□□□ 0.2
GTF3A-202ENST00000419181 CHATP28329 748 aa16.27■□□□□ 0.2
GTF3A-202ENST00000419181 MNDAP41218 407 aa16.27■□□□□ 0.2
GTF3A-202ENST00000419181 HABP2Q14520 560 aaPredicted RBP16.27■□□□□ 0.2
GTF3A-202ENST00000419181 C6orf183Q5T699 404 aa16.27■□□□□ 0.2
GTF3A-202ENST00000419181 TREML4Q6UXN2 200 aa16.27■□□□□ 0.2
GTF3A-202ENST00000419181 C16orf82Q7Z2V1 217 aa16.27■□□□□ 0.2
GTF3A-202ENST00000419181 C8orf31Q8N9H6 132 aa16.27■□□□□ 0.2
GTF3A-202ENST00000419181 PRSS22Q9GZN4 317 aa16.27■□□□□ 0.2
GTF3A-202ENST00000419181 LIN7BQ9HAP6 207 aa16.27■□□□□ 0.2
GTF3A-202ENST00000419181 PLGRKTQ9HBL7 147 aa16.27■□□□□ 0.2
GTF3A-202ENST00000419181 SERTAD4Q9NUC0 356 aa16.27■□□□□ 0.2
GTF3A-202ENST00000419181 AK6Q9Y3D8 172 aaKnown RBP16.27■□□□□ 0.2
GTF3A-202ENST00000419181 A0A1W2PPE3 182 aa16.26■□□□□ 0.19
GTF3A-202ENST00000419181 A0A1W2PPI3 338 aa16.26■□□□□ 0.19
GTF3A-202ENST00000419181 M0QZ24 198 aa16.26■□□□□ 0.19
GTF3A-202ENST00000419181 RCC1P18754 421 aaPredicted RBP16.26■□□□□ 0.19
GTF3A-202ENST00000419181 BLCAPP62952 87 aa16.26■□□□□ 0.19
GTF3A-202ENST00000419181 DIAPH2-AS1Q14236 149 aa16.26■□□□□ 0.19
GTF3A-202ENST00000419181 TMEM30BQ3MIR4 351 aa16.26■□□□□ 0.19
GTF3A-202ENST00000419181 NKAPLQ5M9Q1 402 aa16.26■□□□□ 0.19
GTF3A-202ENST00000419181 FAM53AQ6NSI3 398 aaPredicted RBP16.26■□□□□ 0.19
GTF3A-202ENST00000419181 TRAT1Q6PIZ9 186 aa16.26■□□□□ 0.19
GTF3A-202ENST00000419181 CD200R1LQ6Q8B3 271 aa16.26■□□□□ 0.19
GTF3A-202ENST00000419181 SVOPQ8N4V2 548 aa16.26■□□□□ 0.19
GTF3A-202ENST00000419181 LINC00311Q8N616 119 aa16.26■□□□□ 0.19
GTF3A-202ENST00000419181 KLHDC1Q8N7A1 406 aa16.26■□□□□ 0.19
GTF3A-202ENST00000419181 OR10X1Q8NGY0 326 aa16.26■□□□□ 0.19
GTF3A-202ENST00000419181 NEDD4LQ96PU5 975 aa16.26■□□□□ 0.19
GTF3A-202ENST00000419181 NICN1Q9BSH3 213 aa16.26■□□□□ 0.19
GTF3A-202ENST00000419181 YTHDF1Q9BYJ9 559 aaKnown RBP16.26■□□□□ 0.19
GTF3A-202ENST00000419181 RAB9BQ9NP90 201 aa16.26■□□□□ 0.19
GTF3A-202ENST00000419181 MBNL3Q9NUK0 354 aaKnown RBP16.26■□□□□ 0.19
GTF3A-202ENST00000419181 IGHV3-43A0A0B4J1X8 118 aa16.25■□□□□ 0.19
GTF3A-202ENST00000419181 FAM90A9PA6NNJ1 464 aa16.25■□□□□ 0.19
GTF3A-202ENST00000419181 SPINT2O43291 252 aa16.25■□□□□ 0.19
GTF3A-202ENST00000419181 OR2F2O95006 317 aa16.25■□□□□ 0.19
GTF3A-202ENST00000419181 HBZP02008 142 aa16.25■□□□□ 0.19
GTF3A-202ENST00000419181 IGHV3-43DP0DP04 118 aa16.25■□□□□ 0.19
GTF3A-202ENST00000419181 ARSBP15848 533 aa16.25■□□□□ 0.19
GTF3A-202ENST00000419181 HERPUD1Q15011 391 aa16.25■□□□□ 0.19
GTF3A-202ENST00000419181 P2RY14Q15391 338 aa16.25■□□□□ 0.19
GTF3A-202ENST00000419181 Q3ZCU0 254 aa16.25■□□□□ 0.19
GTF3A-202ENST00000419181 UBE2UQ5VVX9 321 aa16.25■□□□□ 0.19
GTF3A-202ENST00000419181 Q6ZS46 218 aa16.25■□□□□ 0.19
GTF3A-202ENST00000419181 OR2W3Q7Z3T1 314 aa16.25■□□□□ 0.19
GTF3A-202ENST00000419181 SPARTQ8N0X7 666 aa16.25■□□□□ 0.19
GTF3A-202ENST00000419181 MRPL30Q8TCC3 161 aaKnown RBP16.25■□□□□ 0.19
GTF3A-202ENST00000419181 AKR1E2Q96JD6 320 aa16.25■□□□□ 0.19
GTF3A-202ENST00000419181 RBM14Q96PK6 669 aaKnown RBP16.25■□□□□ 0.19
GTF3A-202ENST00000419181 SULT4A1Q9BR01 284 aa16.25■□□□□ 0.19
GTF3A-202ENST00000419181 RRP15Q9Y3B9 282 aaKnown RBP16.25■□□□□ 0.19
GTF3A-202ENST00000419181 TET2Q6N021 2002 aaPredicted RBP16.24■□□□□ 0.19
GTF3A-202ENST00000419181 A0A0A6YYD4 124 aa16.24■□□□□ 0.19
GTF3A-202ENST00000419181 RAB7AP51149 207 aa16.24■□□□□ 0.19
GTF3A-202ENST00000419181 RAB11BQ15907 218 aa16.24■□□□□ 0.19
GTF3A-202ENST00000419181 C6orf201Q7Z4U5 140 aa16.24■□□□□ 0.19
GTF3A-202ENST00000419181 ZNF554Q86TJ5 538 aa16.24■□□□□ 0.19
GTF3A-202ENST00000419181 OR8H3Q8N146 312 aa16.24■□□□□ 0.19
GTF3A-202ENST00000419181 OR1L1Q8NH94 360 aa16.24■□□□□ 0.19
GTF3A-202ENST00000419181 CFHR4Q92496 578 aa16.24■□□□□ 0.19
GTF3A-202ENST00000419181 OCSTAMPQ9BR26 566 aa16.24■□□□□ 0.19
GTF3A-202ENST00000419181 SLC25A33Q9BSK2 321 aa16.24■□□□□ 0.19
GTF3A-202ENST00000419181 LPAR5Q9H1C0 372 aa16.24■□□□□ 0.19
GTF3A-202ENST00000419181 TAF9BQ9HBM6 251 aa16.24■□□□□ 0.19
GTF3A-202ENST00000419181 TRDV1A0A1B0GX56 115 aa16.23■□□□□ 0.19
GTF3A-202ENST00000419181 HSD17B6O14756 317 aa16.23■□□□□ 0.19
GTF3A-202ENST00000419181 VSIG10L2P0DP72 767 aa16.23■□□□□ 0.19
GTF3A-202ENST00000419181 ZNF816Q0VGE8 651 aaPredicted RBP16.23■□□□□ 0.19
GTF3A-202ENST00000419181 Q6ZTK2 550 aa16.23■□□□□ 0.19
GTF3A-202ENST00000419181 THNSL2Q86YJ6 484 aa16.23■□□□□ 0.19
GTF3A-202ENST00000419181 PRR18Q8N4B5 295 aa16.23■□□□□ 0.19
GTF3A-202ENST00000419181 DRAM1Q8N682 238 aa16.23■□□□□ 0.19
GTF3A-202ENST00000419181 ZNF439Q8NDP4 499 aa16.23■□□□□ 0.19
GTF3A-202ENST00000419181 OR56B4Q8NH76 319 aa16.23■□□□□ 0.19
GTF3A-202ENST00000419181 FAAP24Q9BTP7 215 aa16.23■□□□□ 0.19
GTF3A-202ENST00000419181 GNG12Q9UBI6 72 aa16.23■□□□□ 0.19
GTF3A-202ENST00000419181 LRRC42Q9Y546 428 aa16.23■□□□□ 0.19
GTF3A-202ENST00000419181 V9GY05 133 aa16.23■□□□□ 0.19
GTF3A-202ENST00000419181 TRAV1-2A0A0B4J238 106 aa16.22■□□□□ 0.19
GTF3A-202ENST00000419181 SHISA3A0PJX4 238 aa16.22■□□□□ 0.19
GTF3A-202ENST00000419181 CCRL2O00421 344 aa16.22■□□□□ 0.19
GTF3A-202ENST00000419181 SNRNP70P08621 437 aaKnown RBP16.22■□□□□ 0.19
GTF3A-202ENST00000419181 FAM106CPP0CH98 169 aa16.22■□□□□ 0.19
GTF3A-202ENST00000419181 GALP22466 123 aa16.22■□□□□ 0.19
GTF3A-202ENST00000419181 BLVRBP30043 206 aaPredicted RBP16.22■□□□□ 0.19
GTF3A-202ENST00000419181 PSMD7P51665 324 aa16.22■□□□□ 0.19
GTF3A-202ENST00000419181 CLDN12P56749 244 aa16.22■□□□□ 0.19
GTF3A-202ENST00000419181 SLC25A48Q6ZT89 311 aaKnown RBP16.22■□□□□ 0.19
GTF3A-202ENST00000419181 FAM89BQ8N5H3 189 aa16.22■□□□□ 0.19
GTF3A-202ENST00000419181 OR51D1Q8NGF3 324 aa16.22■□□□□ 0.19
GTF3A-202ENST00000419181 WIPF2Q8TF74 440 aaPredicted RBP16.22■□□□□ 0.19
GTF3A-202ENST00000419181 CAPSLQ8WWF8 208 aa16.22■□□□□ 0.19
GTF3A-202ENST00000419181 FCGR1BQ92637 280 aa16.22■□□□□ 0.19
GTF3A-202ENST00000419181 URM1Q9BTM9 101 aaKnown RBP16.22■□□□□ 0.19
GTF3A-202ENST00000419181 WNT10AQ9GZT5 417 aa16.22■□□□□ 0.19
GTF3A-202ENST00000419181 KCNIP1Q9NZI2 227 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms