RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 KPNA3O00505 521 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 ISLRO14498 428 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 SSNA1O43805 119 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 IFNA16P05015 189 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 CECR9P0C854 216 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 PYCR1P32322 319 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 SERPINB9P50453 376 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 TAS2R43P59537 309 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 PPIDQ08752 370 aaKnown RBP1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 ADIGQ0VDE8 80 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 FUT5Q11128 374 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 SKP2Q13309 424 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 TMEM176BQ3YBM2 270 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 OGFRL1Q5TC84 451 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 GLYATQ6IB77 296 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 SFXN4Q6P4A7 337 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 SPINT4Q6UDR6 99 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 COMMD7Q86VX2 200 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 SLC13A5Q86YT5 568 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 SLC35G3Q8N808 338 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 SLC26A10Q8NG04 563 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR4M1Q8NGD0 313 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR5B17Q8NGF7 314 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR1L1Q8NH94 360 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 ZNRF2Q8NHG8 242 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 ERMNQ8TAM6 284 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 ZNF420Q8TAQ5 688 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 SPPL2BQ8TCT7 592 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 EEF1AKMT1Q8WVE0 214 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 ZCCHC13Q8WW36 166 aaKnown RBP1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 SNF8Q96H20 258 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 IP6K3Q96PC2 410 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 CDX2Q99626 313 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 DHRS9Q9BPW9 319 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 MRPL20Q9BYC9 149 aaKnown RBP1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 MROQ9BYG7 248 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 MRPS26Q9BYN8 205 aaKnown RBP1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR51I1Q9H343 314 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 ZSCAN16Q9H4T2 348 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 SPANXB1Q9NS25 103 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 ATPIF1Q9UII2 106 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 BTRCQ9Y297 605 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 SAMHD1Q9Y3Z3 626 aaKnown RBP1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 INSIG2Q9Y5U4 225 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 NRCAMQ92823 1304 aa1.9□□□□□ -2.11
HMGB1P49-201ENST00000418882 ZSWIM8A7E2V4 1837 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 UNC13AQ9UPW8 1703 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 A0A1W2PP64 1363 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 DHX57Q6P158 1386 aaKnown RBP1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 TMEM72A0PK05 275 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 SMIM9A6NGZ8 99 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 TMEM238C9JI98 176 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 I3L4J1 428 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 ACOX3O15254 700 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 IGHV3-11P01762 117 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 APOEP02649 317 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 CD99P14209 185 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 PRPS1L1P21108 318 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 PRTN3P24158 256 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 PSMB9P28065 219 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 CD79BP40259 229 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 AP2S1P53680 142 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 CCL23P55773 120 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 BAMBIQ13145 260 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 SRSF6Q13247 344 aaKnown RBP1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR2F1Q13607 317 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 TAF1AQ15573 450 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 TMEM241Q24JQ0 296 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 TEX30Q5JUR7 227 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 C1orf195Q5TG92 126 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 HES3Q5TGS1 186 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 ZNF773Q6PK81 442 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 TMEM136Q6ZRR5 245 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 VN1R4Q7Z5H5 301 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 MDP1Q86V88 176 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 LRP11Q86VZ4 500 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 TMEM86BQ8N661 226 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 APCDD1LQ8NCL9 501 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 TMEM161BQ8NDZ6 487 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 ZNF555Q8NEP9 628 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 C1orf64Q8NEQ6 169 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR4M2Q8NGB6 313 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR6K3Q8NGY3 331 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR10D3Q8NH80 312 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 FAM57AQ8TBR7 257 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 KLF14Q8TD94 323 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 SMIM12Q96EX1 92 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 EBPLQ9BY08 206 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 C11orf49Q9H6J7 331 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 PARP11Q9NR21 331 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 TAS2R5Q9NYW4 299 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 MMACHCQ9Y4U1 282 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 SNX10Q9Y5X0 201 aa1.89□□□□□ -2.11
HMGB1P49-201ENST00000418882 NLRC5Q86WI3 1866 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 IGHV2-26A0A0B4J1V2 119 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 UPK2O00526 184 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 TCF21O43680 179 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 FADS1O60427 444 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 ARL6IP5O75915 188 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR2A4O95047 310 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms