RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 COMMD4Q9H0A8 199 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 RGCCQ9H4X1 137 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 RNF167Q9H6Y7 350 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 GPR84Q9NQS5 396 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 RSL24D1Q9UHA3 163 aaKnown RBP3.33□□□□□ -1.88
CLK1-203ENST00000409769 HHLA2Q9UM44 414 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 V9GYS6 101 aa3.33□□□□□ -1.88
CLK1-203ENST00000409769 SPTAN1Q13813 2472 aaKnown RBP3.33□□□□□ -1.88
CLK1-203ENST00000409769 CACNA1DQ01668 2161 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 TRAV1-2A0A0B4J238 106 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 A0A1B0GVI7 797 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 DPRXA6NFQ7 191 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 DHRS7CA6NNS2 312 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 C19orf84I3L1E1 186 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 SYT7O43581 403 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 SERPINA3P01011 423 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 OCM2P0CE71 109 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 TUBG1P23258 451 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 ACKR3P25106 362 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 MAPK3P27361 379 aaPredicted RBP3.32□□□□□ -1.88
CLK1-203ENST00000409769 LOXP28300 417 aaPredicted RBP3.32□□□□□ -1.88
CLK1-203ENST00000409769 DDOSTP39656 456 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 UCP2P55851 309 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 LSM3P62310 102 aaKnown RBP3.32□□□□□ -1.88
CLK1-203ENST00000409769 FAM3AP98173 230 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 ZNF92Q03936 586 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 GK2Q14410 553 aaPredicted RBP3.32□□□□□ -1.88
CLK1-203ENST00000409769 CNPY1Q3B7I2 92 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 NCMAPQ5T1S8 102 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 FAM27D1Q5T7N8 215 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 TMEM42Q69YG0 159 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 C22orf42Q6IC83 251 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 ZNF544Q6NX49 715 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 CLEC18BQ6UXF7 455 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 FBXW12Q6X9E4 464 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 UTS2BQ765I0 119 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 CEACAM19Q7Z692 300 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 LYPD6Q86Y78 171 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 C1orf174Q8IYL3 243 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 ZNF676Q8N7Q3 588 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 NKAIN3Q8N8D7 197 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 NHLRC2Q8NBF2 726 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 CCDC54Q8NEL0 328 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 OR2AE1Q8NHA4 323 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 NDNFQ8TB73 568 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 DYNC2LI1Q8TCX1 351 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 CA5BP1Q8WTZ4 195 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 THRSPQ92748 146 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 TMEM106AQ96A25 262 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 MUCL1Q96DR8 90 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 ADAT3Q96EY9 351 aaPredicted RBP3.32□□□□□ -1.88
CLK1-203ENST00000409769 REEP6Q96HR9 211 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 KCTD7Q96MP8 289 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 MED18Q9BUE0 208 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 C1QTNF6Q9BXI9 259 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 BCL2L14Q9BZR8 327 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 DCSTAMPQ9H295 470 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 SP140LQ9H930 580 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 EXOSC4Q9NPD3 245 aaKnown RBP3.32□□□□□ -1.88
CLK1-203ENST00000409769 KCNJ16Q9NPI9 418 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 TUBG2Q9NRH3 451 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 ZNF275Q9NSD4 429 aaPredicted RBP3.32□□□□□ -1.88
CLK1-203ENST00000409769 ZNF391Q9UJN7 358 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 SSR3Q9UNL2 185 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 FOXJ3Q9UPW0 622 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 GSTK1Q9Y2Q3 226 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 STARD10Q9Y365 291 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 RHBDD3Q9Y3P4 386 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 TANC2Q9HCD6 1990 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 DOPEY2Q9Y3R5 2298 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 CHD6Q8TD26 2715 aa3.32□□□□□ -1.88
CLK1-203ENST00000409769 DSCAMO60469 2012 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 IGLV3-9A0A075B6K5 115 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 TRAV8-7A0A075B6U6 113 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 IGKV1-9A0A0C4DH69 117 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 LOC100506127A0A0U1RQW1 187 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 A0A1B0GWJ7 208 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 CCDC160A6NGH7 325 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 TUBAL3A6NHL2 446 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 DEFB108AA8MXU0 73 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 IQCF6A8MYZ5 107 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 SHISA9B4DS77 424 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 ATP6V1G2-DDX39BF2Z307 99 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 H3BSH0 61 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 M0R1B8 84 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 ARL6IP5O75915 188 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 CDRT1O95170 752 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 SRMP19623 302 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 BCL3P20749 454 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 KITLGP21583 273 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 CCNOP22674 350 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 CFL1P23528 166 aaKnown RBP3.31□□□□□ -1.88
CLK1-203ENST00000409769 CALRP27797 417 aaKnown RBP3.31□□□□□ -1.88
CLK1-203ENST00000409769 SDC2P34741 201 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 GLRXP35754 106 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 PEX19P40855 299 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 SERPINB10P48595 397 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 ZNF83P51522 516 aa3.31□□□□□ -1.88
CLK1-203ENST00000409769 NDUFV3P56181 108 aaKnown RBP3.31□□□□□ -1.88
CLK1-203ENST00000409769 OR10A3P58181 314 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms