RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 OR52E2Q8NGJ4 325 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR52P1PQ8NH57 321 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR10G6Q8NH81 332 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 MCFD2Q8NI22 146 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR51E1Q8TCB6 317 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 RAB1CQ92928 201 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 RERGQ96A58 199 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 SDF2Q99470 211 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 MGLLQ99685 303 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 FOXC2Q99958 501 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 TAPBPLQ9BX59 468 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 TSSK6Q9BXA6 273 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 MROQ9BYG7 248 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 NXF2Q9GZY0 626 aaKnown RBP3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR51E2Q9H255 320 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 DCSTAMPQ9H295 470 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 DSN1Q9H410 356 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 TRIM45Q9H8W5 580 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 TVP23BQ9NYZ1 205 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 DNAJC27Q9NZQ0 273 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 RPS6KB2Q9UBS0 482 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 LSM2Q9Y333 95 aaKnown RBP3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 MRPS18BQ9Y676 258 aaKnown RBP3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 CACNG2Q9Y698 323 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 HELZP42694 1942 aaKnown RBP3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 DENND4CQ5VZ89 1909 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 IGHV3-74A0A0B4J1X5 117 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 A0A0J9YY10 115 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 SPTY2D1-AS1A0A0U1RR47 76 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 FUOMA2VDF0 154 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 METTL15A6NJ78 407 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 CPSF4LA6NMK7 179 aaKnown RBP3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 BOLA2-SMG1P6H3BVE0 249 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 K7EMT4 169 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 KPNA4O00629 521 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 SIVA1O15304 175 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR5F1O95221 314 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 HLA-DPB1P04440 258 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 NR2C1P13056 603 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 CTSEP14091 401 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZNF19P17023 458 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 RAB5AP20339 215 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 RPS4Y1P22090 263 aaKnown RBP3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 TUBG1P23258 451 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 CD40LGP29965 261 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 CEACAM3P40198 252 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 CEACAM6P40199 344 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 CXCL5P42830 114 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZNF136P52737 540 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 TAS2R41P59536 307 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 UBE2MP61081 183 aaKnown RBP3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 LCN2P80188 198 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 HOXC5Q00444 222 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 NDPQ00604 133 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 SSX1Q16384 188 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 MAPK14Q16539 360 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 HES5Q5TA89 166 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 NIPAL1Q6NVV3 410 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 WDR82Q6UXN9 313 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 NKAIN4Q8IVV8 208 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 SLC34A3Q8N130 599 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 FAM58AQ8N1B3 248 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 CYP4Z2PQ8N1L4 340 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 STPG2Q8N412 459 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 CDRT4Q8N9R6 151 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR8D4Q8NGM9 314 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR13C9Q8NGT0 318 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 PIGXQ8TBF5 258 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 TEX47Q8TBZ9 253 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 SLC37A2Q8TED4 501 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 PATE1Q8WXA2 126 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 CDS1Q92903 461 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 ISOC2Q96AB3 205 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 MSANTD3Q96H12 275 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 STACQ99469 402 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 MND1Q9BWT6 205 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 PLA2G12AQ9BZM1 189 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 TCEAL2Q9H3H9 227 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 ARMC7Q9H6L4 198 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 CACYBPQ9HB71 228 aaKnown RBP3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 TUBG2Q9NRH3 451 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 IL20Q9NYY1 176 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 CLEC2DQ9UHP7 191 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZNF443Q9Y2A4 671 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 TP53TG5Q9Y2B4 290 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 MTCH2Q9Y6C9 303 aa3.24□□□□□ -1.89
HMGB3P18-201ENST00000406327 IGHV3-64DA0A0J9YX35 117 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 LOC100506127A0A0U1RQW1 187 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 A0A1W2PRF3 423 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 A0A1W2PRM7 423 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 IRGMA1A4Y4 181 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 PLAC8L1A1L4L8 177 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 ISPDA4D126 451 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 TRAPPC13A5PLN9 417 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 PINLYPA6NC86 204 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZNF860A6NHJ4 632 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 FAM166BA8MTA8 275 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 H0Y9J4 135 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 MYL12BO14950 172 aa3.23□□□□□ -1.89
HMGB3P18-201ENST00000406327 CHST10O43529 356 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms