RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 H3BMQ9 156 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 ZNF593O00488 134 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 MYL12BO14950 172 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 TACSTD2P09758 323 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 OR8G3PP0DMU2 310 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 COX5BP10606 129 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 ZNF19P17023 458 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 PSMB1P20618 241 aaKnown RBP3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 NAA10P41227 235 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 RPL5P46777 297 aaKnown RBP3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 TGM4P49221 684 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 ETV1P50549 477 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 WNT4P56705 351 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 TAS2R43P59537 309 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 PCBD1P61457 104 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 MRPS11P82912 194 aaKnown RBP3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 EWSR1Q01844 656 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 EMX1Q04741 257 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 SCRN3Q0VDG4 424 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 ECH1Q13011 328 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 MLLT11Q13015 90 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 AQP6Q13520 282 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 ENDOGQ14249 297 aaKnown RBP3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 PRR4Q16378 134 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 CEACAM16Q2WEN9 425 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 FBXL19-AS1Q494R0 122 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 TIGITQ495A1 244 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 SLC36A2Q495M3 483 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 CCDC58Q4VC31 144 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 ZNF684Q5T5D7 378 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 CARD17Q5XLA6 110 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 OLFML2AQ68BL7 652 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 NCR3LG1Q68D85 454 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 XAF1Q6GPH4 301 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 ZNF322Q6U7Q0 402 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 TMPRSS11AQ6ZMR5 421 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 ERI1Q8IV48 349 aaKnown RBP3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 SLC35F2Q8IXU6 374 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 ZNF679Q8IYX0 411 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 GABRG1Q8N1C3 465 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 UBE2J2Q8N2K1 259 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 C17orf78Q8N4C9 275 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 SLC22A24Q8N4F4 322 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 CNEP1R1Q8N9A8 125 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 OR10H4Q8NGA5 316 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 OR6N2Q8NGY6 317 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 RPS4Y2Q8TD47 263 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 RNF133Q8WVZ7 376 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 RORBQ92753 470 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 ITFG2Q969R8 447 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 HAVCR1Q96D42 359 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 SLC30A2Q9BRI3 323 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 CCDC90BQ9GZT6 254 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 HDHD2Q9H0R4 259 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 C1orf198Q9H425 327 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 ZNF702PQ9H963 129 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 ACOT13Q9NPJ3 140 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 BATF3Q9NR55 127 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 PLSCR3Q9NRY6 295 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 LAMP5Q9UJQ1 280 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 FBXL3Q9UKT7 428 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 MEMO1Q9Y316 297 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 LSM2Q9Y333 95 aaKnown RBP3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 LHFPL6Q9Y693 200 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 SMG1Q96Q15 3661 aaKnown RBP3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 KALRNO60229 2985 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 ROS1P08922 2347 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 PKDREJQ9NTG1 2253 aa3.53□□□□□ -1.85
HMGB3P19-201ENST00000403971 ARFGEF3Q5TH69 2177 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 PPIAL4CA0A0B4J2A2 164 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 A0A1W2PQL4 384 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 METTL15A6NJ78 407 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 ZFP92A6NM28 416 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 ZNF878C9JN71 531 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 CCL21O00585 134 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 UBL3O95164 117 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 MPZL1O95297 269 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 PTHP01270 115 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 IGHV3-23P01764 117 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 APOC1P02654 83 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 KRT8P05787 483 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 ADRA2AP08913 450 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 MRPL3P09001 348 aaKnown RBP3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 MMP7P09237 267 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 PPIAL4GP0DN37 164 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 ZP3P21754 424 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 VDAC1P21796 283 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 GALP22466 123 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 OTX1P32242 354 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 ARR3P36575 388 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 RPL29P47914 159 aaKnown RBP3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 GBX2P52951 348 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 GRB2P62993 217 aaKnown RBP3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 TPBGQ13641 420 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 LAGE3Q14657 143 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 GABRA6Q16445 453 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 SGCAQ16586 387 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 SLC25A35Q3KQZ1 300 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 MOB1BQ7L9L4 216 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 SSX6Q7RTT6 188 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms