RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 HSD17B6O14756 317 aa10.96□□□□□ -0.65
CXCL12-205ENST00000395794 AQP4P55087 323 aa10.96□□□□□ -0.65
CXCL12-205ENST00000395794 HNF4GQ14541 408 aa10.96□□□□□ -0.65
CXCL12-205ENST00000395794 HSD17B12Q53GQ0 312 aa10.96□□□□□ -0.65
CXCL12-205ENST00000395794 RBM48Q5RL73 367 aaKnown RBP10.96□□□□□ -0.65
CXCL12-205ENST00000395794 SYT6Q5T7P8 510 aaPredicted RBP10.96□□□□□ -0.65
CXCL12-205ENST00000395794 CEACAM19Q7Z692 300 aa10.96□□□□□ -0.65
CXCL12-205ENST00000395794 PRR18Q8N4B5 295 aa10.96□□□□□ -0.65
CXCL12-205ENST00000395794 C8orf31Q8N9H6 132 aa10.96□□□□□ -0.65
CXCL12-205ENST00000395794 TMEM104Q8NE00 496 aa10.96□□□□□ -0.65
CXCL12-205ENST00000395794 OR4K15Q8NH41 348 aa10.96□□□□□ -0.65
CXCL12-205ENST00000395794 UBALD1Q8TB05 177 aa10.96□□□□□ -0.65
CXCL12-205ENST00000395794 WIPF2Q8TF74 440 aaPredicted RBP10.96□□□□□ -0.65
CXCL12-205ENST00000395794 PHYHIPQ92561 330 aa10.96□□□□□ -0.65
CXCL12-205ENST00000395794 UFD1Q92890 307 aa10.96□□□□□ -0.65
CXCL12-205ENST00000395794 FAM46BQ96A09 425 aa10.96□□□□□ -0.65
CXCL12-205ENST00000395794 GFOD1Q9NXC2 390 aa10.96□□□□□ -0.65
CXCL12-205ENST00000395794 A0A1W2PRX2 142 aa10.95□□□□□ -0.66
CXCL12-205ENST00000395794 SH2D7A6NKC9 451 aaPredicted RBP10.95□□□□□ -0.66
CXCL12-205ENST00000395794 FAM90A9PA6NNJ1 464 aa10.95□□□□□ -0.66
CXCL12-205ENST00000395794 C12orf77C9JDV5 145 aa10.95□□□□□ -0.66
CXCL12-205ENST00000395794 PDCD6O75340 191 aa10.95□□□□□ -0.66
CXCL12-205ENST00000395794 MPIG6BO95866 241 aa10.95□□□□□ -0.66
CXCL12-205ENST00000395794 IGKV1D-33P01593 117 aa10.95□□□□□ -0.66
CXCL12-205ENST00000395794 IGKV1-33P01594 117 aa10.95□□□□□ -0.66
CXCL12-205ENST00000395794 HSMCR30P0CW71 290 aa10.95□□□□□ -0.66
CXCL12-205ENST00000395794 PF4V1P10720 104 aa10.95□□□□□ -0.66
CXCL12-205ENST00000395794 ZNF816Q0VGE8 651 aaPredicted RBP10.95□□□□□ -0.66
CXCL12-205ENST00000395794 Q3ZCU0 254 aa10.95□□□□□ -0.66
CXCL12-205ENST00000395794 KHDC1LQ5JSQ8 128 aa10.95□□□□□ -0.66
CXCL12-205ENST00000395794 UNQ9370/PRO34162Q6UXP9 181 aa10.95□□□□□ -0.66
CXCL12-205ENST00000395794 LINC00311Q8N616 119 aa10.95□□□□□ -0.66
CXCL12-205ENST00000395794 Q96M66 194 aa10.95□□□□□ -0.66
CXCL12-205ENST00000395794 NEDD4LQ96PU5 975 aa10.95□□□□□ -0.66
CXCL12-205ENST00000395794 CCDC90BQ9GZT6 254 aa10.95□□□□□ -0.66
CXCL12-205ENST00000395794 TSSC4Q9Y5U2 329 aaPredicted RBP10.95□□□□□ -0.66
CXCL12-205ENST00000395794 IGHV3-43A0A0B4J1X8 118 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 UBE2QL1A1L167 161 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 RGS10O43665 173 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 HBZP02008 142 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 AMY1AP04745 511 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 AMY2AP04746 511 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 IGHV3-43DP0DP04 118 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 SRMP19623 302 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 MYF6P23409 242 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 VHLP40337 213 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 REG1BP48304 166 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 LOXL3P58215 753 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 SLC35A2P78381 396 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 CD83Q01151 205 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 DIAPH2-AS1Q14236 149 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 INSL4Q14641 139 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 TRAM1Q15629 374 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 NKAPLQ5M9Q1 402 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 FAM27D1Q5T7N8 215 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 LIPKQ5VXJ0 399 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 LYPD6Q86Y78 171 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 KCNG3Q8TAE7 436 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 NRG4Q8WWG1 115 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 KIAA2026Q5HYC2 2103 aa10.94□□□□□ -0.66
CXCL12-205ENST00000395794 IGHV1-3A0A0C4DH29 117 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 PSMB11A5LHX3 300 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 NCBP2LA6PVI3 153 aaKnown RBP10.93□□□□□ -0.66
CXCL12-205ENST00000395794 G3V4G9 280 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 FGF16O43320 207 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 TXNL1O43396 289 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 SC5DO75845 299 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 RCC1P18754 421 aaPredicted RBP10.93□□□□□ -0.66
CXCL12-205ENST00000395794 PSMA1P25786 263 aaKnown RBP10.93□□□□□ -0.66
CXCL12-205ENST00000395794 HTR2CP28335 458 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 RANBP1P43487 201 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 HSPA13P48723 471 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 FBLN7Q53RD9 439 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 ZNF554Q86TJ5 538 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 LRRTM1Q86UE6 522 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 GAPTQ8N292 157 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 C5orf56Q8N8D9 126 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 OR10V1Q8NGI7 309 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 OR2T10Q8NGZ9 312 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 TMEM203Q969S6 136 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 TMEM59Q9BXS4 323 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 ANKRD60Q9BZ19 345 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 DUSP21Q9H596 190 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 TAF9BQ9HBM6 251 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 OR2S2Q9NQN1 319 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 LSM2Q9Y333 95 aaKnown RBP10.93□□□□□ -0.66
CXCL12-205ENST00000395794 LRRC42Q9Y546 428 aa10.93□□□□□ -0.66
CXCL12-205ENST00000395794 IGHV3-72A0A0B4J1Y9 119 aa10.92□□□□□ -0.66
CXCL12-205ENST00000395794 SERPINE3A8MV23 424 aa10.92□□□□□ -0.66
CXCL12-205ENST00000395794 ARL6IP5O75915 188 aa10.92□□□□□ -0.66
CXCL12-205ENST00000395794 PF4P02776 101 aa10.92□□□□□ -0.66
CXCL12-205ENST00000395794 UCHL1P09936 223 aa10.92□□□□□ -0.66
CXCL12-205ENST00000395794 CD33P20138 364 aa10.92□□□□□ -0.66
CXCL12-205ENST00000395794 SLC35B1P78383 322 aa10.92□□□□□ -0.66
CXCL12-205ENST00000395794 IRF3Q14653 427 aa10.92□□□□□ -0.66
CXCL12-205ENST00000395794 C1orf100Q5SVJ3 147 aa10.92□□□□□ -0.66
CXCL12-205ENST00000395794 STEAP3Q658P3 488 aa10.92□□□□□ -0.66
CXCL12-205ENST00000395794 SLC25A48Q6ZT89 311 aaKnown RBP10.92□□□□□ -0.66
CXCL12-205ENST00000395794 SLC35E3Q7Z769 313 aa10.92□□□□□ -0.66
CXCL12-205ENST00000395794 TGIF2LXQ8IUE1 241 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms