RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 PRR18Q8N4B5 295 aa17.59■□□□□ 0.41
CLK3-202ENST00000395066 IL1F10Q8WWZ1 152 aa17.59■□□□□ 0.41
CLK3-202ENST00000395066 PLA2G3Q9NZ20 509 aa17.59■□□□□ 0.41
CLK3-202ENST00000395066 LOC400499M0QZD8 3231 aa17.59■□□□□ 0.41
CLK3-202ENST00000395066 LY86O95711 162 aa17.59■□□□□ 0.41
CLK3-202ENST00000395066 SOD3P08294 240 aa17.59■□□□□ 0.41
CLK3-202ENST00000395066 TLE4Q04727 773 aa17.59■□□□□ 0.41
CLK3-202ENST00000395066 TMEM267Q0VDI3 215 aaPredicted RBP17.59■□□□□ 0.41
CLK3-202ENST00000395066 CEACAM21Q3KPI0 293 aa17.59■□□□□ 0.41
CLK3-202ENST00000395066 DCAF12Q5T6F0 453 aa17.59■□□□□ 0.41
CLK3-202ENST00000395066 GFI1BQ5VTD9 330 aa17.59■□□□□ 0.41
CLK3-202ENST00000395066 GPR179Q6PRD1 2367 aa17.59■□□□□ 0.41
CLK3-202ENST00000395066 IL22RA1Q8N6P7 574 aa17.59■□□□□ 0.41
CLK3-202ENST00000395066 ABHD14BQ96IU4 210 aa17.59■□□□□ 0.41
CLK3-202ENST00000395066 TECTBQ96PL2 329 aa17.59■□□□□ 0.41
CLK3-202ENST00000395066 PRDM13Q9H4Q3 707 aa17.59■□□□□ 0.41
CLK3-202ENST00000395066 MAGEA5P43359 124 aa17.58■□□□□ 0.41
CLK3-202ENST00000395066 PAX9P55771 341 aa17.58■□□□□ 0.41
CLK3-202ENST00000395066 CMTM1Q8IZ96 169 aa17.58■□□□□ 0.41
CLK3-202ENST00000395066 HIST3H2BBQ8N257 126 aa17.58■□□□□ 0.41
CLK3-202ENST00000395066 OR13D1Q8NGV5 346 aa17.58■□□□□ 0.41
CLK3-202ENST00000395066 GPR61Q9BZJ8 451 aa17.58■□□□□ 0.41
CLK3-202ENST00000395066 GFOD1Q9NXC2 390 aa17.58■□□□□ 0.41
CLK3-202ENST00000395066 PGLYRP1O75594 196 aaPredicted RBP17.58■□□□□ 0.4
CLK3-202ENST00000395066 TUSC2O75896 110 aa17.58■□□□□ 0.4
CLK3-202ENST00000395066 HBE1P02100 147 aa17.58■□□□□ 0.4
CLK3-202ENST00000395066 JMJD7P0C870 316 aa17.58■□□□□ 0.4
CLK3-202ENST00000395066 UCP1P25874 307 aa17.58■□□□□ 0.4
CLK3-202ENST00000395066 LHX2P50458 406 aa17.58■□□□□ 0.4
CLK3-202ENST00000395066 BAXQ07812 192 aa17.58■□□□□ 0.4
CLK3-202ENST00000395066 PDZD11Q5EBL8 140 aa17.58■□□□□ 0.4
CLK3-202ENST00000395066 SPATA46Q5T0L3 261 aa17.58■□□□□ 0.4
CLK3-202ENST00000395066 PCSK4Q6UW60 755 aa17.58■□□□□ 0.4
CLK3-202ENST00000395066 Q8NFD4 153 aa17.58■□□□□ 0.4
CLK3-202ENST00000395066 LOXL2Q9Y4K0 774 aa17.58■□□□□ 0.4
CLK3-202ENST00000395066 MED13Q9UHV7 2174 aa17.57■□□□□ 0.4
CLK3-202ENST00000395066 CEACAM1P13688 526 aa17.57■□□□□ 0.4
CLK3-202ENST00000395066 HIST1H1BP16401 226 aaKnown RBP17.57■□□□□ 0.4
CLK3-202ENST00000395066 VDAC1P21796 283 aa17.57■□□□□ 0.4
CLK3-202ENST00000395066 DUSP3P51452 185 aaPredicted RBP17.57■□□□□ 0.4
CLK3-202ENST00000395066 ID3Q02535 119 aa17.57■□□□□ 0.4
CLK3-202ENST00000395066 KHDC3LQ587J8 217 aa17.57■□□□□ 0.4
CLK3-202ENST00000395066 MED12LQ86YW9 2145 aa17.57■□□□□ 0.4
CLK3-202ENST00000395066 MRPL30Q8TCC3 161 aaKnown RBP17.57■□□□□ 0.4
CLK3-202ENST00000395066 ATP23Q9Y6H3 246 aa17.57■□□□□ 0.4
CLK3-202ENST00000395066 KIAA2026Q5HYC2 2103 aa17.57■□□□□ 0.4
CLK3-202ENST00000395066 NCOR1O75376 2440 aa17.57■□□□□ 0.4
CLK3-202ENST00000395066 ELOA3CA0A087WX78 387 aaPredicted RBP17.57■□□□□ 0.4
CLK3-202ENST00000395066 RHBDL1O75783 438 aa17.57■□□□□ 0.4
CLK3-202ENST00000395066 NEURL1O76050 574 aa17.57■□□□□ 0.4
CLK3-202ENST00000395066 PSG2P11465 335 aa17.57■□□□□ 0.4
CLK3-202ENST00000395066 PLA2G5P39877 138 aa17.57■□□□□ 0.4
CLK3-202ENST00000395066 HLA-DRB3P79483 266 aa17.57■□□□□ 0.4
CLK3-202ENST00000395066 MKXQ8IYA7 352 aa17.57■□□□□ 0.4
CLK3-202ENST00000395066 OR1A1Q9P1Q5 309 aa17.57■□□□□ 0.4
CLK3-202ENST00000395066 SERPINA7P05543 415 aa17.56■□□□□ 0.4
CLK3-202ENST00000395066 CLDN18P56856 261 aa17.56■□□□□ 0.4
CLK3-202ENST00000395066 C6orf15Q6UXA7 325 aaPredicted RBP17.56■□□□□ 0.4
CLK3-202ENST00000395066 ZNF295-AS1Q8N0V1 137 aa17.56■□□□□ 0.4
CLK3-202ENST00000395066 OR2M7Q8NG81 312 aa17.56■□□□□ 0.4
CLK3-202ENST00000395066 ZNF703Q9H7S9 590 aaPredicted RBP17.56■□□□□ 0.4
CLK3-202ENST00000395066 ERRFI1Q9UJM3 462 aaPredicted RBP17.56■□□□□ 0.4
CLK3-202ENST00000395066 OR2T2Q6IF00 324 aa17.56■□□□□ 0.4
CLK3-202ENST00000395066 Q6ZRM9 215 aa17.56■□□□□ 0.4
CLK3-202ENST00000395066 TMEM45BQ96B21 275 aa17.56■□□□□ 0.4
CLK3-202ENST00000395066 RNF115Q9Y4L5 304 aa17.56■□□□□ 0.4
CLK3-202ENST00000395066 KNTC1P50748 2209 aa17.55■□□□□ 0.4
CLK3-202ENST00000395066 NBEAQ8NFP9 2946 aa17.55■□□□□ 0.4
CLK3-202ENST00000395066 TRAV24A0A0B4J272 114 aa17.55■□□□□ 0.4
CLK3-202ENST00000395066 CLEC18AA5D8T8 446 aa17.55■□□□□ 0.4
CLK3-202ENST00000395066 CD300LBA8K4G0 201 aa17.55■□□□□ 0.4
CLK3-202ENST00000395066 B4DEV8 164 aa17.55■□□□□ 0.4
CLK3-202ENST00000395066 DPPA3Q6W0C5 159 aa17.55■□□□□ 0.4
CLK3-202ENST00000395066 LINC00696Q6ZRV3 163 aa17.55■□□□□ 0.4
CLK3-202ENST00000395066 CLEC18CQ8NCF0 446 aa17.55■□□□□ 0.4
CLK3-202ENST00000395066 GPR146Q96CH1 333 aa17.55■□□□□ 0.4
CLK3-202ENST00000395066 ATP5SQ99766 215 aa17.55■□□□□ 0.4
CLK3-202ENST00000395066 HIPK2Q9H2X6 1198 aa17.55■□□□□ 0.4
CLK3-202ENST00000395066 TRGC1P0CF51 173 aa17.55■□□□□ 0.4
CLK3-202ENST00000395066 MMP9P14780 707 aa17.55■□□□□ 0.4
CLK3-202ENST00000395066 Q6ZS49 121 aa17.55■□□□□ 0.4
CLK3-202ENST00000395066 THNSL2Q86YJ6 484 aa17.55■□□□□ 0.4
CLK3-202ENST00000395066 APOBEC3DQ96AK3 386 aaPredicted RBP17.55■□□□□ 0.4
CLK3-202ENST00000395066 S100PBPQ96BU1 408 aa17.55■□□□□ 0.4
CLK3-202ENST00000395066 RHOVQ96L33 236 aa17.55■□□□□ 0.4
CLK3-202ENST00000395066 C12orf49Q9H741 205 aa17.55■□□□□ 0.4
CLK3-202ENST00000395066 BOKQ9UMX3 212 aaPredicted RBP17.55■□□□□ 0.4
CLK3-202ENST00000395066 LOC102723971A0A1B0GUV8 181 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 CD200P41217 278 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 TAS2R30P59541 319 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 SSPNQ14714 243 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 FAM210BQ96KR6 192 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 RSG1Q9BU20 258 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 KIR2DS1A0A191URI9 304 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 DUXBA0A1W2PPF3 345 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 FAM90A10PA6NDY2 464 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 FAM90A18PA6NE21 464 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 FAM90A16PA6NEW6 464 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 FAM90A20PA6NIJ5 464 aa17.54■□□□□ 0.4
CLK3-202ENST00000395066 FAM90A8PA6NJQ4 464 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms