RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 COX6A1P12074 109 aa13.88□□□□□ -0.19
PCDH1-203ENST00000394536 CTAG1AP78358 180 aa13.88□□□□□ -0.19
PCDH1-203ENST00000394536 SLC38A11Q08AI6 406 aa13.88□□□□□ -0.19
PCDH1-203ENST00000394536 SLC23A3Q6PIS1 610 aa13.88□□□□□ -0.19
PCDH1-203ENST00000394536 MSI2Q96DH6 328 aaKnown RBP13.88□□□□□ -0.19
PCDH1-203ENST00000394536 IGKV1D-13A0A0B4J2D9 117 aa13.88□□□□□ -0.19
PCDH1-203ENST00000394536 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.88□□□□□ -0.19
PCDH1-203ENST00000394536 SLC22A20A6NK97 555 aa13.88□□□□□ -0.19
PCDH1-203ENST00000394536 PITX3O75364 302 aa13.88□□□□□ -0.19
PCDH1-203ENST00000394536 IGKV1-13P0DP09 117 aa13.88□□□□□ -0.19
PCDH1-203ENST00000394536 MAGEA5P43359 124 aa13.88□□□□□ -0.19
PCDH1-203ENST00000394536 BATFQ16520 125 aa13.88□□□□□ -0.19
PCDH1-203ENST00000394536 VHLLQ6RSH7 139 aa13.88□□□□□ -0.19
PCDH1-203ENST00000394536 ZIC4Q8N9L1 334 aa13.88□□□□□ -0.19
PCDH1-203ENST00000394536 OR13D1Q8NGV5 346 aa13.88□□□□□ -0.19
PCDH1-203ENST00000394536 M1APQ8TC57 530 aa13.88□□□□□ -0.19
PCDH1-203ENST00000394536 ENY2Q9NPA8 101 aa13.88□□□□□ -0.19
PCDH1-203ENST00000394536 LIN7CQ9NUP9 197 aaKnown RBP13.88□□□□□ -0.19
PCDH1-203ENST00000394536 OR2W1Q9Y3N9 320 aa13.88□□□□□ -0.19
PCDH1-203ENST00000394536 PKDREJQ9NTG1 2253 aa13.88□□□□□ -0.19
PCDH1-203ENST00000394536 PDGFBP01127 241 aaPredicted RBP13.87□□□□□ -0.19
PCDH1-203ENST00000394536 IGHEP01854 428 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 CHRNA7P36544 502 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 WDR25Q64LD2 544 aaPredicted RBP13.87□□□□□ -0.19
PCDH1-203ENST00000394536 GPR146Q96CH1 333 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 TECTBQ96PL2 329 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 RTL8AQ9BWD3 113 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 HES7Q9BYE0 225 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 LYRM2Q9NU23 88 aaPredicted RBP13.87□□□□□ -0.19
PCDH1-203ENST00000394536 FZR1Q9UM11 496 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 CA11O75493 328 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 PGLYRP1O75594 196 aaPredicted RBP13.87□□□□□ -0.19
PCDH1-203ENST00000394536 HEXAP06865 529 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 ARR3P36575 388 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 TAS2R30P59541 319 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 LYPD6Q86Y78 171 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 FADS6Q8N9I5 356 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 NABP1Q96AH0 204 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 OR51M1Q9H341 326 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 RPRMQ9NS64 109 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 RNF212BA8MTL3 300 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 SH2D1BO14796 132 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 FGF7P21781 194 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 COL19A1Q14993 1142 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 OR8G1Q15617 311 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 SAP25Q8TEE9 199 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 RHOVQ96L33 236 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 GGACTQ9BVM4 153 aa13.87□□□□□ -0.19
PCDH1-203ENST00000394536 PATZ1Q9HBE1 687 aaKnown RBP13.87□□□□□ -0.19
PCDH1-203ENST00000394536 OR1C1Q15619 314 aa13.86□□□□□ -0.19
PCDH1-203ENST00000394536 BTNL3Q6UXE8 466 aa13.86□□□□□ -0.19
PCDH1-203ENST00000394536 ZNF552Q9H707 407 aaPredicted RBP13.86□□□□□ -0.19
PCDH1-203ENST00000394536 METTL1Q9UBP6 276 aaKnown RBP13.86□□□□□ -0.19
PCDH1-203ENST00000394536 ZNF318Q5VUA4 2279 aa13.86□□□□□ -0.19
PCDH1-203ENST00000394536 VCANP13611 3396 aa13.86□□□□□ -0.19
PCDH1-203ENST00000394536 SEC14L6B5MCN3 397 aa13.86□□□□□ -0.19
PCDH1-203ENST00000394536 TIMM8AO60220 97 aaPredicted RBP13.86□□□□□ -0.19
PCDH1-203ENST00000394536 OR3A1P47881 315 aa13.86□□□□□ -0.19
PCDH1-203ENST00000394536 EDDM3BP56851 147 aa13.86□□□□□ -0.19
PCDH1-203ENST00000394536 HGFACQ04756 655 aa13.86□□□□□ -0.19
PCDH1-203ENST00000394536 TBC1D28Q2M2D7 210 aa13.86□□□□□ -0.19
PCDH1-203ENST00000394536 TMEM41BQ5BJD5 291 aa13.86□□□□□ -0.19
PCDH1-203ENST00000394536 OPA3Q9H6K4 179 aa13.86□□□□□ -0.19
PCDH1-203ENST00000394536 WDR54Q9H977 334 aa13.86□□□□□ -0.19
PCDH1-203ENST00000394536 hCG_38984A0A1B0GV85 526 aa13.86□□□□□ -0.19
PCDH1-203ENST00000394536 FOSL1P15407 271 aa13.86□□□□□ -0.19
PCDH1-203ENST00000394536 CPEB3Q8NE35 698 aaKnown RBP13.86□□□□□ -0.19
PCDH1-203ENST00000394536 OR1A1Q9P1Q5 309 aa13.86□□□□□ -0.19
PCDH1-203ENST00000394536 C5orf52A6NGY3 159 aa13.85□□□□□ -0.19
PCDH1-203ENST00000394536 LINC01387J3KSC0 135 aa13.85□□□□□ -0.19
PCDH1-203ENST00000394536 CTSSP25774 331 aa13.85□□□□□ -0.19
PCDH1-203ENST00000394536 GCH1P30793 250 aa13.85□□□□□ -0.19
PCDH1-203ENST00000394536 FGF12P61328 243 aa13.85□□□□□ -0.19
PCDH1-203ENST00000394536 H3F3AP84243 136 aa13.85□□□□□ -0.19
PCDH1-203ENST00000394536 SLC10A1Q14973 349 aa13.85□□□□□ -0.19
PCDH1-203ENST00000394536 OR8B8Q15620 311 aa13.85□□□□□ -0.19
PCDH1-203ENST00000394536 TMEM241Q24JQ0 296 aa13.85□□□□□ -0.19
PCDH1-203ENST00000394536 PROB1E7EW31 1015 aa13.85□□□□□ -0.19
PCDH1-203ENST00000394536 PGA5P0DJD9 388 aa13.85□□□□□ -0.19
PCDH1-203ENST00000394536 TPRX1Q8N7U7 411 aa13.85□□□□□ -0.19
PCDH1-203ENST00000394536 Q9N2K0 584 aa13.85□□□□□ -0.19
PCDH1-203ENST00000394536 EML5Q05BV3 1969 aa13.85□□□□□ -0.19
PCDH1-203ENST00000394536 FOXO1Q12778 655 aa13.85□□□□□ -0.19
PCDH1-203ENST00000394536 RSPO1Q2MKA7 263 aaPredicted RBP13.85□□□□□ -0.19
PCDH1-203ENST00000394536 POLDIP2Q9Y2S7 368 aa13.85□□□□□ -0.19
PCDH1-203ENST00000394536 PRR14LQ5THK1 2151 aa13.85□□□□□ -0.19
PCDH1-203ENST00000394536 SPTBN1Q01082 2364 aaKnown RBP13.84□□□□□ -0.19
PCDH1-203ENST00000394536 CEACAM18A8MTB9 384 aa13.84□□□□□ -0.19
PCDH1-203ENST00000394536 UMODP07911 640 aa13.84□□□□□ -0.19
PCDH1-203ENST00000394536 SELEP16581 610 aa13.84□□□□□ -0.19
PCDH1-203ENST00000394536 ERVK-16P61578 105 aa13.84□□□□□ -0.19
PCDH1-203ENST00000394536 FFAR4Q5NUL3 377 aa13.84□□□□□ -0.19
PCDH1-203ENST00000394536 MEGF10Q96KG7 1140 aa13.84□□□□□ -0.19
PCDH1-203ENST00000394536 OR2D2Q9H210 308 aa13.84□□□□□ -0.19
PCDH1-203ENST00000394536 TP53TG5Q9Y2B4 290 aa13.84□□□□□ -0.19
PCDH1-203ENST00000394536 ATP23Q9Y6H3 246 aa13.84□□□□□ -0.19
PCDH1-203ENST00000394536 LRP5LA4QPB2 252 aa13.84□□□□□ -0.19
PCDH1-203ENST00000394536 CELA3AP09093 270 aa13.84□□□□□ -0.19
PCDH1-203ENST00000394536 KHDC3LQ587J8 217 aa13.84□□□□□ -0.19
PCDH1-203ENST00000394536 MRPL14Q6P1L8 145 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms