RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 OR1L1Q8NH94 360 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 C12orf4Q9NQ89 552 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 FAM96BQ9Y3D0 163 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 SESN1Q9Y6P5 492 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 IGHV2-26A0A0B4J1V2 119 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 HBZP02008 142 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 CD3GP09693 182 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 LGALS4P56470 323 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 RBMS3Q6XE24 437 aaKnown RBP9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 PRIMA1Q86XR5 153 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 GAPTQ8N292 157 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 SIGLECL1Q8N7X8 197 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 OR10V1Q8NGI7 309 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 OR13D1Q8NGV5 346 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 ZNF48Q96MX3 618 aaPredicted RBP9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 DCUN1D5Q9BTE7 237 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 KCNIP1Q9NZI2 227 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 MRPS7Q9Y2R9 242 aaKnown RBP9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 C15orf65H3BRN8 121 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 SDCBPO00560 298 aaPredicted RBP9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 MFNGO00587 321 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 RGS5O15539 181 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 HPGDSO60760 199 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 NAPSAO96009 420 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 PLA1AQ53H76 456 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 NUDCD2Q8WVJ2 157 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 S100A16Q96FQ6 103 aaKnown RBP9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 ZNF286AQ9HBT8 521 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 IDI2-AS1Q9NZ38 188 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 GNG12Q9UBI6 72 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 NPIPB11E5RHQ5 1161 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 SPINT2O43291 252 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 RBP4P02753 201 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 EIF4EP06730 217 aaKnown RBP9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 ZNF182P17025 639 aaPredicted RBP9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 SOX6P35712 828 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 SCAND1P57086 179 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 C6orf183Q5T699 404 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 ZDHHC16Q969W1 377 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 CLEC7AQ9BXN2 247 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 NCOR1P1Q9H4R4 102 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 OR2S2Q9NQN1 319 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 DIABLOQ9NR28 239 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 MBNL3Q9NUK0 354 aaKnown RBP9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 PSG11Q9UQ72 335 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 HILPDAQ9Y5L2 63 aa9.54□□□□□ -0.88
DEPDC4-202ENST00000378244 ORC5O43913 435 aa9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 TALDO1P37837 337 aa9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 SCGB2A2Q13296 93 aa9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 SSX2Q16385 188 aa9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 UBE2NLQ5JXB2 153 aa9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 LDLRAD2Q5SZI1 272 aa9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 OR52W1Q6IF63 320 aa9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 OR52L2PQ8NGH6 319 aa9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 DYNC2LI1Q8TCX1 351 aa9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 ZNF418Q8TF45 676 aaPredicted RBP9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 GCDHQ92947 438 aaPredicted RBP9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 KCTD12Q96CX2 325 aaKnown RBP9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 ST6GALNAC5Q9BVH7 336 aa9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 RBM38Q9H0Z9 239 aaKnown RBP9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 RSL24D1Q9UHA3 163 aaKnown RBP9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 FBN1P35555 2871 aaKnown RBP9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 DPPA5A6NC42 116 aa9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 SERPINE3A8MV23 424 aa9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 CTDSP2O14595 271 aa9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 TOR1AO14656 332 aa9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 IFNA2P01563 188 aa9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 SCTP09683 121 aa9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 ELK1P19419 428 aa9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 AP3S1Q92572 193 aa9.53□□□□□ -0.88
DEPDC4-202ENST00000378244 FAM25AB3EWG3 89 aa9.52□□□□□ -0.89
DEPDC4-202ENST00000378244 FAM25CB3EWG5 89 aa9.52□□□□□ -0.89
DEPDC4-202ENST00000378244 FAM25GB3EWG6 89 aa9.52□□□□□ -0.89
DEPDC4-202ENST00000378244 MNDAP41218 407 aa9.52□□□□□ -0.89
DEPDC4-202ENST00000378244 LOXL3P58215 753 aa9.52□□□□□ -0.89
DEPDC4-202ENST00000378244 GNG2P59768 71 aa9.52□□□□□ -0.89
DEPDC4-202ENST00000378244 GNMTQ14749 295 aa9.52□□□□□ -0.89
DEPDC4-202ENST00000378244 ZNF260Q3ZCT1 412 aa9.52□□□□□ -0.89
DEPDC4-202ENST00000378244 TMEM69Q5SWH9 247 aa9.52□□□□□ -0.89
DEPDC4-202ENST00000378244 HACD4Q5VWC8 232 aa9.52□□□□□ -0.89
DEPDC4-202ENST00000378244 ZNF626Q68DY1 528 aa9.52□□□□□ -0.89
DEPDC4-202ENST00000378244 OR11H6Q8NGC7 330 aa9.52□□□□□ -0.89
DEPDC4-202ENST00000378244 ACOT12Q8WYK0 555 aa9.52□□□□□ -0.89
DEPDC4-202ENST00000378244 GALMQ96C23 342 aa9.52□□□□□ -0.89
DEPDC4-202ENST00000378244 BCL7BQ9BQE9 202 aa9.52□□□□□ -0.89
DEPDC4-202ENST00000378244 C6orf62Q9GZU0 229 aaPredicted RBP9.52□□□□□ -0.89
DEPDC4-202ENST00000378244 ABCG5Q9H222 651 aa9.52□□□□□ -0.89
DEPDC4-202ENST00000378244 RIMS4Q9H426 269 aaPredicted RBP9.52□□□□□ -0.89
DEPDC4-202ENST00000378244 COL6A5A8TX70 2615 aa9.52□□□□□ -0.89
DEPDC4-202ENST00000378244 MEIS3P1A6NDR6 274 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 HOXA3O43365 443 aaPredicted RBP9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 TMEM127O75204 238 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 SCGNO76038 276 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 FCGR3AP08637 254 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 ATF4P18848 351 aaPredicted RBP9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 PPP1CCP36873 323 aaKnown RBP9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 RAB13P51153 203 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 BPIFB3P59826 476 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 MZT2AQ6P582 158 aa9.51□□□□□ -0.89
DEPDC4-202ENST00000378244 DYNAPQ8N1N2 210 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms