RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 PHYHIPQ92561 330 aa13.68□□□□□ -0.22
USP11-202ENST00000377078 UFD1Q92890 307 aa13.68□□□□□ -0.22
USP11-202ENST00000377078 GFOD1Q9NXC2 390 aa13.68□□□□□ -0.22
USP11-202ENST00000377078 A0A1W2PPE3 182 aa13.67□□□□□ -0.22
USP11-202ENST00000377078 TCRBV4S1A1TA0A5B7 111 aa13.67□□□□□ -0.22
USP11-202ENST00000377078 PF4V1P10720 104 aa13.67□□□□□ -0.22
USP11-202ENST00000377078 HSD17B12Q53GQ0 312 aa13.67□□□□□ -0.22
USP11-202ENST00000377078 MOB3BQ86TA1 216 aa13.67□□□□□ -0.22
USP11-202ENST00000377078 FAM46BQ96A09 425 aa13.67□□□□□ -0.22
USP11-202ENST00000377078 Q96M66 194 aa13.67□□□□□ -0.22
USP11-202ENST00000377078 KCNIP1Q9NZI2 227 aa13.67□□□□□ -0.22
USP11-202ENST00000377078 NKX1-2Q9UD57 310 aaPredicted RBP13.67□□□□□ -0.22
USP11-202ENST00000377078 TSSC4Q9Y5U2 329 aaPredicted RBP13.67□□□□□ -0.22
USP11-202ENST00000377078 C12orf77C9JDV5 145 aa13.66□□□□□ -0.22
USP11-202ENST00000377078 FGF16O43320 207 aa13.66□□□□□ -0.22
USP11-202ENST00000377078 TXNL1O43396 289 aa13.66□□□□□ -0.22
USP11-202ENST00000377078 PDCD6O75340 191 aa13.66□□□□□ -0.22
USP11-202ENST00000377078 IGKV1D-33P01593 117 aa13.66□□□□□ -0.22
USP11-202ENST00000377078 IGKV1-33P01594 117 aa13.66□□□□□ -0.22
USP11-202ENST00000377078 AMY1AP04745 511 aa13.66□□□□□ -0.22
USP11-202ENST00000377078 AMY2AP04746 511 aa13.66□□□□□ -0.22
USP11-202ENST00000377078 AQP4P55087 323 aa13.66□□□□□ -0.22
USP11-202ENST00000377078 CD83Q01151 205 aa13.66□□□□□ -0.22
USP11-202ENST00000377078 HNF4GQ14541 408 aa13.66□□□□□ -0.22
USP11-202ENST00000377078 KHDC1LQ5JSQ8 128 aa13.66□□□□□ -0.22
USP11-202ENST00000377078 UNQ9370/PRO34162Q6UXP9 181 aa13.66□□□□□ -0.22
USP11-202ENST00000377078 CEACAM19Q7Z692 300 aa13.66□□□□□ -0.22
USP11-202ENST00000377078 ZNF554Q86TJ5 538 aa13.66□□□□□ -0.22
USP11-202ENST00000377078 PRR18Q8N4B5 295 aa13.66□□□□□ -0.22
USP11-202ENST00000377078 TMEM104Q8NE00 496 aa13.66□□□□□ -0.22
USP11-202ENST00000377078 OR4K15Q8NH41 348 aa13.66□□□□□ -0.22
USP11-202ENST00000377078 UBALD1Q8TB05 177 aa13.66□□□□□ -0.22
USP11-202ENST00000377078 IGHV3-43A0A0B4J1X8 118 aa13.65□□□□□ -0.22
USP11-202ENST00000377078 IGHV1-3A0A0C4DH29 117 aa13.65□□□□□ -0.22
USP11-202ENST00000377078 A0A1W2PRX2 142 aa13.65□□□□□ -0.22
USP11-202ENST00000377078 MPIG6BO95866 241 aa13.65□□□□□ -0.22
USP11-202ENST00000377078 IGHV3-43DP0DP04 118 aa13.65□□□□□ -0.22
USP11-202ENST00000377078 RANBP1P43487 201 aa13.65□□□□□ -0.22
USP11-202ENST00000377078 LOXL3P58215 753 aa13.65□□□□□ -0.22
USP11-202ENST00000377078 SLC35A2P78381 396 aa13.65□□□□□ -0.22
USP11-202ENST00000377078 DIAPH2-AS1Q14236 149 aa13.65□□□□□ -0.22
USP11-202ENST00000377078 TRAM1Q15629 374 aa13.65□□□□□ -0.22
USP11-202ENST00000377078 LYPD6Q86Y78 171 aa13.65□□□□□ -0.22
USP11-202ENST00000377078 GAPTQ8N292 157 aa13.65□□□□□ -0.22
USP11-202ENST00000377078 NEDD4LQ96PU5 975 aa13.65□□□□□ -0.22
USP11-202ENST00000377078 UBE2QL1A1L167 161 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 SH2D7A6NKC9 451 aaPredicted RBP13.64□□□□□ -0.23
USP11-202ENST00000377078 G3V4G9 280 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 RGS10O43665 173 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 SC5DO75845 299 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 HBZP02008 142 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 PF4P02776 101 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 HSMCR30P0CW71 290 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 SRMP19623 302 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 MYF6P23409 242 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 PSMA1P25786 263 aaKnown RBP13.64□□□□□ -0.23
USP11-202ENST00000377078 REG1BP48304 166 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 HSPA13P48723 471 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 FBLN7Q53RD9 439 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 NKAPLQ5M9Q1 402 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 SAMD5Q5TGI4 173 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 LIPKQ5VXJ0 399 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 STEAP3Q658P3 488 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 IZUMO1Q8IYV9 350 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 C5orf56Q8N8D9 126 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 OR2T10Q8NGZ9 312 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 KCNG3Q8TAE7 436 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 CHPT1Q8WUD6 406 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 TMEM59Q9BXS4 323 aa13.64□□□□□ -0.23
USP11-202ENST00000377078 LSM2Q9Y333 95 aaKnown RBP13.64□□□□□ -0.23
USP11-202ENST00000377078 PSMB11A5LHX3 300 aa13.63□□□□□ -0.23
USP11-202ENST00000377078 ADARB2-AS1A8MUL3 147 aa13.63□□□□□ -0.23
USP11-202ENST00000377078 SERPINE3A8MV23 424 aa13.63□□□□□ -0.23
USP11-202ENST00000377078 ARL6IP5O75915 188 aa13.63□□□□□ -0.23
USP11-202ENST00000377078 HTR2CP28335 458 aa13.63□□□□□ -0.23
USP11-202ENST00000377078 INSL4Q14641 139 aa13.63□□□□□ -0.23
USP11-202ENST00000377078 FAM27D1Q5T7N8 215 aa13.63□□□□□ -0.23
USP11-202ENST00000377078 SLC25A48Q6ZT89 311 aaKnown RBP13.63□□□□□ -0.23
USP11-202ENST00000377078 REC114Q7Z4M0 266 aa13.63□□□□□ -0.23
USP11-202ENST00000377078 LRRTM1Q86UE6 522 aa13.63□□□□□ -0.23
USP11-202ENST00000377078 TGIF2LXQ8IUE1 241 aa13.63□□□□□ -0.23
USP11-202ENST00000377078 FOXRED2Q8IWF2 684 aa13.63□□□□□ -0.23
USP11-202ENST00000377078 OR6M1Q8NGM8 313 aa13.63□□□□□ -0.23
USP11-202ENST00000377078 NRG4Q8WWG1 115 aa13.63□□□□□ -0.23
USP11-202ENST00000377078 RTN4IP1Q8WWV3 396 aaPredicted RBP13.63□□□□□ -0.23
USP11-202ENST00000377078 ANKRD60Q9BZ19 345 aa13.63□□□□□ -0.23
USP11-202ENST00000377078 CCDC90BQ9GZT6 254 aa13.63□□□□□ -0.23
USP11-202ENST00000377078 TAF9BQ9HBM6 251 aa13.63□□□□□ -0.23
USP11-202ENST00000377078 OR2S2Q9NQN1 319 aa13.63□□□□□ -0.23
USP11-202ENST00000377078 LRRC42Q9Y546 428 aa13.63□□□□□ -0.23
USP11-202ENST00000377078 NCBP2LA6PVI3 153 aaKnown RBP13.62□□□□□ -0.23
USP11-202ENST00000377078 RGS11O94810 467 aa13.62□□□□□ -0.23
USP11-202ENST00000377078 UCHL1P09936 223 aa13.62□□□□□ -0.23
USP11-202ENST00000377078 RCC1P18754 421 aaPredicted RBP13.62□□□□□ -0.23
USP11-202ENST00000377078 CD33P20138 364 aa13.62□□□□□ -0.23
USP11-202ENST00000377078 CD1BP29016 333 aa13.62□□□□□ -0.23
USP11-202ENST00000377078 VHLP40337 213 aa13.62□□□□□ -0.23
USP11-202ENST00000377078 SLC35B1P78383 322 aa13.62□□□□□ -0.23
USP11-202ENST00000377078 EBI3Q14213 229 aa13.62□□□□□ -0.23
USP11-202ENST00000377078 IRF3Q14653 427 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms