RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 CDKN1BP46527 198 aa12.6□□□□□ -0.39
TOP3B-201ENST00000357179 UBE2NP61088 152 aaKnown RBP12.6□□□□□ -0.39
TOP3B-201ENST00000357179 ZNF695Q8IW36 515 aa12.6□□□□□ -0.39
TOP3B-201ENST00000357179 SELENOHQ8IZQ5 122 aaKnown RBP12.6□□□□□ -0.39
TOP3B-201ENST00000357179 GJC3Q8NFK1 279 aa12.6□□□□□ -0.39
TOP3B-201ENST00000357179 RSG1Q9BU20 258 aa12.6□□□□□ -0.39
TOP3B-201ENST00000357179 OR51B6Q9H340 312 aa12.6□□□□□ -0.39
TOP3B-201ENST00000357179 ZNF814B7Z6K7 855 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 CHRNB4P30926 498 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 RPL15P61313 204 aaKnown RBP12.59□□□□□ -0.39
TOP3B-201ENST00000357179 SELENOTP62341 195 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 LCN2P80188 198 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 TMEM183BQ1AE95 376 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 RHBDD2Q6NTF9 364 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 SLC25A24Q6NUK1 477 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 FOXL2NBQ6ZUU3 175 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 CPEB3Q8NE35 698 aaKnown RBP12.59□□□□□ -0.39
TOP3B-201ENST00000357179 PLPPR1Q8TBJ4 325 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 RNF115Q9Y4L5 304 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 CCDC163A0A0D9SF12 145 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 TRBV11-1A0A0K0K1C0 115 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 A0A1W2PNR3 127 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 C5orf63A6NC05 138 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 MSR1P21757 451 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 AADACP22760 399 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 NMSQ5H8A3 153 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 OR2M3Q8NG83 312 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 FOXJ2Q9P0K8 574 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 A0A1B0GUS0 222 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 TCN2P20062 427 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 GUCA1AP43080 201 aaPredicted RBP12.59□□□□□ -0.39
TOP3B-201ENST00000357179 HERV-K104P61576 105 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 MEF2BQ02080 365 aaPredicted RBP12.59□□□□□ -0.39
TOP3B-201ENST00000357179 C10orf128Q5T292 105 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 PIGTQ969N2 578 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 SLC35E1Q96K37 410 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 PSMG3Q9BT73 122 aaPredicted RBP12.59□□□□□ -0.39
TOP3B-201ENST00000357179 METTL7AQ9H8H3 244 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 ZNF286AQ9HBT8 521 aa12.59□□□□□ -0.39
TOP3B-201ENST00000357179 UBE2J1Q9Y385 318 aaPredicted RBP12.59□□□□□ -0.39
TOP3B-201ENST00000357179 ZNF737O75373 536 aa12.58□□□□□ -0.4
TOP3B-201ENST00000357179 OTX1P32242 354 aaPredicted RBP12.58□□□□□ -0.4
TOP3B-201ENST00000357179 LEMD1Q68G75 181 aa12.58□□□□□ -0.4
TOP3B-201ENST00000357179 RABEPKQ7Z6M1 372 aa12.58□□□□□ -0.4
TOP3B-201ENST00000357179 TSTD1Q8NFU3 115 aa12.58□□□□□ -0.4
TOP3B-201ENST00000357179 IL22RA2Q969J5 263 aa12.58□□□□□ -0.4
TOP3B-201ENST00000357179 RPUSD4Q96CM3 377 aaKnown RBP12.58□□□□□ -0.4
TOP3B-201ENST00000357179 FER1L5A0AVI2 2057 aa12.58□□□□□ -0.4
TOP3B-201ENST00000357179 SEC16AO15027 2179 aa12.58□□□□□ -0.4
TOP3B-201ENST00000357179 C20orf202A1L168 122 aa12.58□□□□□ -0.4
TOP3B-201ENST00000357179 TMEM250H0YL14 139 aa12.58□□□□□ -0.4
TOP3B-201ENST00000357179 FAHP16930 419 aa12.58□□□□□ -0.4
TOP3B-201ENST00000357179 MDH2P40926 338 aaKnown RBP12.58□□□□□ -0.4
TOP3B-201ENST00000357179 NXPH1P58417 271 aa12.58□□□□□ -0.4
TOP3B-201ENST00000357179 DYRK2Q92630 601 aa12.58□□□□□ -0.4
TOP3B-201ENST00000357179 DUXBA0A1W2PPF3 345 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 SLC33A1O00400 549 aaPredicted RBP12.57□□□□□ -0.4
TOP3B-201ENST00000357179 TDGF1P13385 188 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 GCH1P30793 250 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 CST9LP1Q5W188 147 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 Q6ZWC4 215 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 EXTL1Q92935 676 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 PIGLQ9Y2B2 252 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 PAM16Q9Y3D7 125 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 NKX6-3A6NJ46 265 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 PPYP01298 95 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 CD33P20138 364 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 IL3RAP26951 378 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 FOXL2P58012 376 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 KCNIP4Q6PIL6 250 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 WDR74Q6RFH5 385 aaPredicted RBP12.57□□□□□ -0.4
TOP3B-201ENST00000357179 TBC1D26Q86UD7 250 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 DEFB119Q8N690 84 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 TMEM54Q969K7 222 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 SPSB1Q96BD6 273 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 PARLQ9H300 379 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 PXMP4Q9Y6I8 212 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 KNL1Q8NG31 2342 aa12.57□□□□□ -0.4
TOP3B-201ENST00000357179 CCL25O15444 150 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 PIAS2O75928 621 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 ZFAND5O76080 213 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 GLB1P16278 677 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 EN2P19622 333 aaPredicted RBP12.56□□□□□ -0.4
TOP3B-201ENST00000357179 VDAC1P21796 283 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 GNRHRP30968 328 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 CLDN17P56750 224 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 SERF2P84101 59 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 FADS6Q8N9I5 356 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 SCGB1C1Q8TD33 95 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 SPOCK3Q9BQ16 436 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 VAMP8Q9BV40 100 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 PLK3Q9H4B4 646 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 TRAPPC1Q9Y5R8 145 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 F5H5K5 113 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 K7EP13 123 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 OPN1LWP04000 364 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 EPHA8P29322 1005 aaPredicted RBP12.56□□□□□ -0.4
TOP3B-201ENST00000357179 KLF3P57682 345 aaPredicted RBP12.56□□□□□ -0.4
TOP3B-201ENST00000357179 DTX1Q86Y01 620 aa12.56□□□□□ -0.4
TOP3B-201ENST00000357179 OR10G3Q8NGC4 313 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms